Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00516 ATGTCAATTGTTCCAATCAACCAAGGTCACTCCCAGGACTCTTGGGATCAATTCATCGATTTTCCTCTCCCTCCTTCCATCTCCAGCTTCTTCCCCGGCTTCGAATTCGGATTCGGCTCATCGGTGGTTAACACACGTGTGGACTGGAGGGAGACTCCCAGAGCCCACGTGTGGAAGGTCGTGCTTCCTGGCTTCACAAACGAGGACGTGCTGGTTGAGCTACAAGACCAGAGGGTGCTCCAGGTCAGCGTGGAGAGTGGTAACTTCCTGACGAGGTTTAAGATCCCCGACAACGGTAACCTCGAACAACTCAAAACCAACATGCGTCACGGGATTCTCCTTGTCACTGTTCCCAAGTTTCATCAACCCACTTCTAATAGGAATGTCAGGGTCGTTGAGATTGAAGGCACCGACTGA 417 0.518 MSIVPINQGHSQDSWDQFIDFPLPPSISSFFPGFEFGFGSSVVNTRVDWRETPRAHVWKVVLPGFTNEDVLVELQDQRVLQVSVESGNFLTRFKIPDNGNLEQLKTNMRHGILLVTVPKFHQPTSNRNVRVVEIEGTD 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00516 138 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 1 137 - -
Gma12g00516 138 SUPERFAMILY HSP20-like chaperones 17 124 IPR008978 -
Gma12g00516 138 Gene3D - 10 136 IPR008978 -
Gma12g00516 138 PANTHER 17.5 KDA CLASS I HEAT SHOCK PROTEIN 1 137 - -
Gma12g00516 138 Pfam Hsp20/alpha crystallin family 48 134 IPR002068 -
Gma12g00516 138 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 38 135 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00516 Gma-Chr12 4316696 4317494 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00516 K13993 - gmx:100305751 248.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00516 12 4316696 4317494 Gma11g01216 11 10391465 10392353 GST