Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00512 ATGCGCAAAGTGAAGTATACTCAGCAGAATTTTCATGACAAGCTCTCCACAATAATCGACGAGTTCCCCAGGCTCGACGATATTCATCCTTTCTATGGCGATCTCCTCCATGTGCTCTACAATAAGGACCACTACAAGCTTGCTCTTGGCCAAATTAACACTGCCAGGAATCTCATTGtctgcaacaagactgacttgcagccacttgaggggatatctgaggaagACATGAAGTTGGTCAATGAGATGAAAGCGGAAGCCTTGAAGACTCTAGTTGGTCAAGGTGGTGAGCCTACAGACAATAACAGTGTATTGTTGACCATGAGCACTTTGACAGAAGAAGGGGTAATTGCTGTGAAAAATGCAGCATGTGAGAGGTTATTGGATCAGAGGGTGGAGATAAAGATGAAATCAAAGAAAATTAATGACTGCTTGAACAGGTTTCATGTTGCAGTACCAAAGCCTCGTGACCAGAAGGAAAGGCCTCCATGTATTCCTCAAGCAGTTTTAGAAGCTAAAGCTAAGCAAGCAGCTGAGAAGGAAAAGAGAAAAACTGAAAAGGATCTGGAGGATGAGAATGGTGGGGCGGGTGTATACTCAATGAACTTGAGAAAGAATTACATTTTGGCCGATGATGAATGGAAAGAGGATGTGCTGCCAGAAATTTTGGATGGACACAATGTGTATGATTTCATTGATCCTGATATTCTGCATAGGGTTGAAGAGTTGGAAAGAGAAGAAGGGATGAGACAGGAAGAAGCTGAGGATGGTGATTTTGAGATTGATGGAACTGAATTGACGCCCGAGCAGCAAGCAGCTTTAGCTGAGATTAGGAAAAAGAAAAGCTTGCTCATCCAGCAGCATAGGATCAAAAAGAGCAATGCAGAGAATCGGCCAACTGTTCCAAGGAAGTTTGATAAGGACAAGCAGTTCACCTCAGAAAGAATGGGAAGGCAATTGTCATCTTTGGGGCTTGATCCCACTTTGGCAATTAAGAGAATGCGCAGCAGATCTGCTTCTAGAGGTCGGAAAAGGGAAAGATCGCCTGAAATGAGAAGTGCTGATGGTATGGATATTGATGGTGATACACCTAGCAAAAAACAGCGTCTGAGTAGATCACTGTCACGGTCCAGCGTTCCAATGGAAAAACTGAGAGACGCTAGGACAGGGGATGCTGTTTTCTTCATTTTAGAGACACCTGTTGGCATTTTTCGTGGCTGCCAAAATTTTGTTATTTCATATTAG 1245 0.4161 MRKVKYTQQNFHDKLSTIIDEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLIVCNKTDLQPLEGISEEDMKLVNEMKAEALKTLVGQGGEPTDNNSVLLTMSTLTEEGVIAVKNAACERLLDQRVEIKMKSKKINDCLNRFHVAVPKPRDQKERPPCIPQAVLEAKAKQAAEKEKRKTEKDLEDENGGAGVYSMNLRKNYILADDEWKEDVLPEILDGHNVYDFIDPDILHRVEELEREEGMRQEEAEDGDFEIDGTELTPEQQAALAEIRKKKSLLIQQHRIKKSNAENRPTVPRKFDKDKQFTSERMGRQLSSLGLDPTLAIKRMRSRSASRGRKRERSPEMRSADGMDIDGDTPSKKQRLSRSLSRSSVPMEKLRDARTGDAVFFILETPVGIFRGCQNFVISY 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00512 414 PANTHER NUCLEOLAR GTP-BINDING PROTEIN 1 58 358 - -
Gma12g00512 414 Pfam NOGCT (NUC087) domain 183 236 IPR012973 -
Gma12g00512 414 Gene3D - 1 91 - -
Gma12g00512 414 MobiDBLite consensus disorder prediction 343 369 - -
Gma12g00512 414 Pfam NOG1 N-terminal helical domain 1 89 IPR041623 -
Gma12g00512 414 PANTHER NUCLEOLAR GTP-BINDING PROTEIN 1 58 358 - -
Gma12g00512 414 MobiDBLite consensus disorder prediction 291 314 - -
Gma12g00512 414 MobiDBLite consensus disorder prediction 288 383 - -
Gma12g00512 414 Coils Coil 175 195 - -
Gma12g00512 414 PANTHER NUCLEOLAR GTP-BINDING PROTEIN 1 1 59 - -
Gma12g00512 414 PANTHER NUCLEOLAR GTP-BINDING PROTEIN 1 1 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00512 Gma-Chr12 4277321 4279540 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00512 K06943 - gmx:100784033 583.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00512 12 4277321 4279540 Gma12g00512 12 4277321 4279540 ECH
Gma12g00512 12 4277321 4279540 Gma11g01212 11 10343495 10346547 GST