Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00511 ATGTGGAAGGTGGCGGTGCCATGGAATTGGATTTGGAGGCCAATGGCTTCTCCGCCTCTAACTGCCTTCACATGCCAAAATCTCCACACGCTAAACCCTAGGCCTCGATGTCGCAGCTTCAAGCTTTTCTGTCGACCTTCTTTTTCCGCCGTCGCGCAGCCCTCGCCTCCTCTCTCCGGCGACCTTGACCGCTACCTCCGCTGCTCCATGCCGCAGAACTCGCCGCTTCGAGTCGCCGTTCTCGTCAGCGGAGGCGTCGATAGCAGCGTCGCTCTCCGGCTGCTCCACGCCGCCGGTCACTCCTGCACCGCTTTCTACCTCAAGATATGGTTCCAAGAAGATTTCGAGAACTTTTGGTCGGAGTGCCCCTGGGAAGAGGATTTGAAGTATGCTAAAGATGTTTGTAATCAGGTTGATGTGCCGTTAGAAGTTGTTCATTTAACCGATGAATACTGGAACAATGTGGTTTCTTACCTCATTGAAGAGTATAGTAGTGGCCGAACCCCTAACCCTGATGTTCTCTGCAATACAAGAATAAAGTTTGGTGCATTCTTGGATGCAATTGGTGGCATGGGTTTTGACTATGTTGCCTCTGGGCATTATGCAAATGTTATCCACCCATGTGCTGATTGGATGGATGAGCCTTCTGTTCTGGAACTATCACAAGACATGGTAAAGGATCAAACATACTTCCTTTCACACCTCTCACAATCCCAGCTGAGGCGACTTCTTTTTCCGCTTGGTTGTATTCCCAAGGATGAAGTCCGCAAGCTTGCCACAAAATTTGATCTACCAAATAAGGATAGAAAGGATTCCCAAGGAATATGCTTTTTGGGCAAGATAAGATTCAGTGAATTTGTTACCAGACATATTGGGGAGAGAGAAGGTATCATCCTGGAAGCTGAGACAGGAGATTTCCTTGGCAAACATCGGGGATTTTGTGGGTTGCCCCCAGGCCAGACAAGTCAGCTTCAATGCAAGGTGAGACATGGTCCTGGATTCTATGATTGTAGCTTACAAATGGAAGTGGAAGGAGATGGCCAGTGTCGCTCTGCTGTTGTCTGCATATCTGAAGATGATCAAGGCCTAGCAGCTGGCCAGTTTGCGGCCTTCTATGAGGGAAGAACATGCATAGGTTCTGGTGTGATTTTGGAGTTCTGGGATGATCAGAGTTTTCCAGTATGTACAAAAGCTTTAGAAATTGCTAGGATGGAAGATAAATCGAAGATTGGGAATCCGGTAAAAATAAAAGTTAAACCAGATAACCCGCAAGTGTGTGATTCTGCAGAGTTAGCAAGTAAAACATCATAA 1311 0.4744 MWKVAVPWNWIWRPMASPPLTAFTCQNLHTLNPRPRCRSFKLFCRPSFSAVAQPSPPLSGDLDRYLRCSMPQNSPLRVAVLVSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSECPWEEDLKYAKDVCNQVDVPLEVVHLTDEYWNNVVSYLIEEYSSGRTPNPDVLCNTRIKFGAFLDAIGGMGFDYVASGHYANVIHPCADWMDEPSVLELSQDMVKDQTYFLSHLSQSQLRRLLFPLGCIPKDEVRKLATKFDLPNKDRKDSQGICFLGKIRFSEFVTRHIGEREGIILEAETGDFLGKHRGFCGLPPGQTSQLQCKVRHGPGFYDCSLQMEVEGDGQCRSAVVCISEDDQGLAAGQFAAFYEGRTCIGSGVILEFWDDQSFPVCTKALEIARMEDKSKIGNPVKIKVKPDNPQVCDSAELASKTS 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00511 436 Pfam tRNA methyl transferase HUP domain 77 280 - -
Gma12g00511 436 Gene3D HUPs 63 289 IPR014729 -
Gma12g00511 436 TIGRFAM trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 77 328 IPR004506 GO:0008033|GO:0016740
Gma12g00511 436 Pfam Aminomethyltransferase beta-barrel domain 316 383 IPR046885 -
Gma12g00511 436 CDD tRNA_Me_trans 77 383 IPR004506 GO:0008033|GO:0016740
Gma12g00511 436 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 77 302 - -
Gma12g00511 436 Gene3D Translation factors 308 392 - -
Gma12g00511 436 PANTHER - 63 313 - -
Gma12g00511 436 PANTHER - 315 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00511 Gma-Chr12 4272381 4275895 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00511 K21027 - gmx:100785275 608.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00511 12 4272381 4275895 Gma12g00511 12 4272381 4275895 ECH
Gma12g00511 12 4272381 4275895 Gma11g01211 11 10338856 10342912 GST