Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00510 ATGGCACGCACTCTAACACTAACACCTATCTCTTTCACTCTCGCTAAAACCCTAAACCCCATTTTCCCATTCCACAACACTCTTCCCTTCTCCTCTTCAATCCTTTCTCGCCAGAAGCTCACTCGCCGGAGCCTATCCCGCTCCGTCCTCCGTCCTACCGCCGGCGAACTTTCCGGCAGCGTCGACGACGATGAAGAATCGGGCGAATTGGACGACCTCGATCTCGTCGCCCTCGAGCAAGAAGCCAAGGATGCCGTCGAAGCGTATTCAAGCTCTCTGTCTCAAATTTTGAGCATTGAAGACGAGGAGAAAAGTGATCGCAAGGAATCAGCTCAATCACGCAGGAAGAGTCCACGTAGAACAAAAATTATTCCTGACAATCTTCTCCCAAGGGTTGCAATTGTTGGAAGGCCAAATGTTGGCAAATCAGCATTATTTAATCGTCTTGTTGGGGGAAACAGGGCAATTGTGGTGGATGAACCTGGGGTCACCAGGGATCGTTTGTATGGTCGATCGTATTGGGGAGAGCATGAATTCATGGTAGTCGACACAGGTGGGGTTATCACCGTTTCAAAATCACAAGCTACTGTTATGGAAGAGTTGGCTATTACTACTACCATTGGTATGGATGGCATTCCACTTGCTGTTAGAGAGGCAGCTGTTGCCAGGATGCCCTCAATGATTGAGAGACAAGCAACTGCAGCTGTGGAAGAATCATCTGTGATTATTTTTCTGGTTGATGGTCAGGCCGGTCTAACAGCAGCAGACGAGGAAATTGCTGATTGGCTACGTAAAAACTACTCAGATAAATATGTCATTCTTGCAGTTAACAAGTGTGAATCTCCACGCAAAAGAATTATGCAGGCATCTGAATTTTGGTCCCTTGGATTTGAACCACTTCCAATATCAGCTATCTCAGGGACTGGAACTGGAGAGCTTCTTGACCTTGTTTGTTCTGGCCTACAGAAAATTGAGGAATCTAATAATCTTGTTGAAGAAGATTATGTTCCAGCAATTTCAATTGTTGGTAGACCTAATGTTGGCAAAAGTAGCATTTTGAATGCACTGGTTGGTGAGGACAGAACAATAGTCAGCCCCATCAGTGGCACTACCCGTGATGCTATTGATACTGAATTTACTGGACCAGATGGACAGAAGTTCCAACTTATTGATACTGCTGGAATCAGGAAAAGAACAGCCATTGCTTCAGCTGGGAGTACAACAGAGGCTTTATCAGTGAATCGAGCATTTCGTGCTATTCGTCGTTCTGATGTTGTTGCTCTTGTCATCGAGGCCATGGCTTGTATCACAGAACAGGACTACAAGATAGCTGAAAGGATAGAAAAAGAAGGGAAAGGTTGTGTGATAGTTGTAAACAAGTGGGATACAATACCAAATAAAAACCAGCAGACTGCATCATACTATGAGCAAGATGTCAGGGAGAAGCTTCGCTCACTTGTCTGGGCTCCAATTGTTTATTCTACTGCTGTAGCTGGTCATAGTGTTGACAAGATTATTGTTGCTGCTATTGAAGTTGAAAAGGAGAGATCAAGAAGACTTGGGACTTCTATATTGAATCAAGTAGTTCAGGAAGCAGTAGGTTTTAAGCCTCCTCCCAGGACACGCGGTGGAAAAAGAGGGCGTGTTTACTATTGCACTCAGGCTGCTATAAGGCCACCTACATTTGTGTTCTTCGTCAATGATGCAAAACTTTTTCCTGAGACTTACCGGCGCTATATGGAGAAGCAACTGCGTACAGATGCAGGTTTTTCTGGTACACCCATTCGACTTCTCTGGCGCAGCAGAAGGAAAATGGGAAAAGATGAAGGCAAACCTGTAACAAAGACCCGAGAAAATCTTACATCAAATGATCGAAAATTGGTGTCAACTACACCATAG 1899 0.4487 MARTLTLTPISFTLAKTLNPIFPFHNTLPFSSSILSRQKLTRRSLSRSVLRPTAGELSGSVDDDEESGELDDLDLVALEQEAKDAVEAYSSSLSQILSIEDEEKSDRKESAQSRRKSPRRTKIIPDNLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRLYGRSYWGEHEFMVVDTGGVITVSKSQATVMEELAITTTIGMDGIPLAVREAAVARMPSMIERQATAAVEESSVIIFLVDGQAGLTAADEEIADWLRKNYSDKYVILAVNKCESPRKRIMQASEFWSLGFEPLPISAISGTGTGELLDLVCSGLQKIEESNNLVEEDYVPAISIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPDGQKFQLIDTAGIRKRTAIASAGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDYKIAERIEKEGKGCVIVVNKWDTIPNKNQQTASYYEQDVREKLRSLVWAPIVYSTAVAGHSVDKIIVAAIEVEKERSRRLGTSILNQVVQEAVGFKPPPRTRGGKRGRVYYCTQAAIRPPTFVFFVNDAKLFPETYRRYMEKQLRTDAGFSGTPIRLLWRSRRKMGKDEGKPVTKTRENLTSNDRKLVSTTP 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00510 632 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 130 322 IPR027417 -
Gma12g00510 632 ProSiteProfiles EngA-type guanine nucleotide-binding (G) domain profile. 130 325 IPR031166 GO:0005525
Gma12g00510 632 Pfam 50S ribosome-binding GTPase 131 278 IPR006073 GO:0005525
Gma12g00510 632 Pfam 50S ribosome-binding GTPase 339 460 IPR006073 GO:0005525
Gma12g00510 632 PANTHER GTPASE DER 107 609 - -
Gma12g00510 632 Gene3D - 127 335 IPR027417 -
Gma12g00510 632 Pfam KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 519 600 IPR032859 -
Gma12g00510 632 MobiDBLite consensus disorder prediction 601 622 - -
Gma12g00510 632 MobiDBLite consensus disorder prediction 100 122 - -
Gma12g00510 632 ProSiteProfiles EngA-type guanine nucleotide-binding (G) domain profile. 337 517 IPR031166 GO:0005525
Gma12g00510 632 MobiDBLite consensus disorder prediction 601 632 - -
Gma12g00510 632 Hamap GTPase Der [der]. 129 603 IPR016484 GO:0005525
Gma12g00510 632 TIGRFAM small_GTP: small GTP-binding protein domain 337 504 IPR005225 GO:0005525
Gma12g00510 632 Gene3D - 336 517 IPR027417 -
Gma12g00510 632 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 298 606 IPR027417 -
Gma12g00510 632 PANTHER GTP-BINDING PROTEIN 107 609 - -
Gma12g00510 632 Gene3D - 519 603 IPR015946 -
Gma12g00510 632 CDD EngA1 133 321 - -
Gma12g00510 632 CDD EngA2 339 512 - -
Gma12g00510 632 PRINTS GTP1/OBG GTP-binding protein family signature 339 359 IPR006073 GO:0005525
Gma12g00510 632 PRINTS GTP1/OBG GTP-binding protein family signature 413 431 IPR006073 GO:0005525
Gma12g00510 632 TIGRFAM GTPase_EngA: ribosome-associated GTPase EngA 223 599 IPR016484 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00510 Gma-Chr12 4265615 4271521 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00510 - - gmx:100777588 1203.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00510 12 4265615 4271521 Gma12g00510 12 4265615 4271521 ECH
Gma12g00510 12 4265615 4271521 Gma11g01210 11 10336669 10337632 GST