Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00462 ATGGCAACTTCGTTATTCCGCAGCATAAGGAGAGCTTTCTTTGCTCTCAGATTCTCGTACTCTACCTCGTTTTCGGTCTCTCCCAGGTCAGTTGTTGGGAGGACTCAGATGTGTGTTTGTTCTCCGTTGAGGCACTGTGTCCCGGTGGGAGAGCAAGGTTATTGGTGGGGTTTGAGAAATTTGAGCTATGGCAGGGTGAACCTTGTGATAACGGGAGGGAAGACCAAGTTTGAGACTCATGAGGAAGAGCCTCCGAAGAAGGACAAGTGGACGACAAAGAAGAGGTTGAAGATGCAGAGGAAGAGAGAGAAGGAGAAGAGGAGAGCGGCCAACAGGAAGGACCCCCGTCAACTCGGCATCAAAGGGAAGAAGAAGAAGCAGAGATTTGCCTGTGCAGAAGAGAGAATCAAGTACAAGATTGAAAAAGCCAGAATTAAGGAAGCATTGCTCATTGAAAGGCTCAAACGATATGAAGTTCCTAAAGCTCAGGGTCCTGTTGTAAAGCCTGATGACTTGACGGGGGAGGAACGATTTTATTTGAAGAAAATGGCTCAGAAGAGATCTAATTATCTACAAATTGGCAGAAGAGGATTATTTGGAGGGGTTGTTCTCAATATGCATATGCATTGGAAGAAACATGAGACTGTTAAGGTCTTTTGCAAGCCTTGTAAACCTGGTCAAGTACATGAGTATGCACAAGAACTTGCCAGATTGAGTGGTGGTATTCCACTTCAAATAATTGGAGATGACACTATAATATTTTATCGCGGAAAGAACTATGAACAGCCTGAGGTTATGTCACCAATTGATACCCTGTCCAAGAAAAAGGCACTTGAAAAATCCAAGTATGAGCAATCACTTGAGTCAGTGAGGCGCTTCATTGCTATCGCTGAGAAAGAATTAGAGCTATATTGTAGGCACGTTGCACTCTATGGTGATCCAAACAACCGAAATCCCTTATCAATGATGGACGGCCCAAGTGGAAACTCAAAGGAAAAAGGTAATCATGGAATTAGTGATGATTTTTCAGTCAGTCTTTCAGAGACTGAAGCAGACTCCACGGAAATGGAGCTATCAGAAATAGAAGATAGTCTTGAAGATGAAAACATGTCAATGAATGAATCAGATTCTGAAGAGGACAGCATGTTGGATTCCAATGGTAATCAAGAAAGAGAGGTATATTTTACTAAAATTCAAGATGAAAGTGTAAGCTCGACCACAGGTTCTTGTTCTTCATCAGTGTCTGAAGATAGCCACTATTATAATAAGCAATACTTATAA 1281 0.4231 MATSLFRSIRRAFFALRFSYSTSFSVSPRSVVGRTQMCVCSPLRHCVPVGEQGYWWGLRNLSYGRVNLVITGGKTKFETHEEEPPKKDKWTTKKRLKMQRKREKEKRRAANRKDPRQLGIKGKKKKQRFACAEERIKYKIEKARIKEALLIERLKRYEVPKAQGPVVKPDDLTGEERFYLKKMAQKRSNYLQIGRRGLFGGVVLNMHMHWKKHETVKVFCKPCKPGQVHEYAQELARLSGGIPLQIIGDDTIIFYRGKNYEQPEVMSPIDTLSKKKALEKSKYEQSLESVRRFIAIAEKELELYCRHVALYGDPNNRNPLSMMDGPSGNSKEKGNHGISDDFSVSLSETEADSTEMELSEIEDSLEDENMSMNESDSEEDSMLDSNGNQEREVYFTKIQDESVSSTTGSCSSSVSEDSHYYNKQYL 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00462 426 Coils Coil 93 113 - -
Gma12g00462 426 MobiDBLite consensus disorder prediction 387 426 - -
Gma12g00462 426 PANTHER GROUP II INTRON SPLICING FACTOR CRS1-LIKE 1 386 IPR040286 -
Gma12g00462 426 MobiDBLite consensus disorder prediction 315 426 - -
Gma12g00462 426 SMART CRS1_YhbY_2 172 256 IPR001890 GO:0003723
Gma12g00462 426 MobiDBLite consensus disorder prediction 353 383 - -
Gma12g00462 426 MobiDBLite consensus disorder prediction 91 107 - -
Gma12g00462 426 SUPERFAMILY YhbY-like 172 266 IPR035920 -
Gma12g00462 426 ProSiteProfiles CRM domain profile. 170 267 IPR001890 GO:0003723
Gma12g00462 426 Pfam CRS1 / YhbY (CRM) domain 172 256 IPR001890 GO:0003723
Gma12g00462 426 MobiDBLite consensus disorder prediction 77 125 - -
Gma12g00462 426 PANTHER GROUP II INTRON SPLICING FACTOR CRS1-LIKE 1 386 - -
Gma12g00462 426 Gene3D - 172 270 IPR035920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00462 Gma-Chr12 3785556 3789496 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00462 - - gmx:100796393 775.393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00462 12 3785556 3789496 Gma12g00462 12 3785556 3789496 ECH
Gma12g00462 12 3785556 3789496 Gma11g01163 11 9786459 9797506 GST