Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00459 ATGGGGAAGCCTTTGTTTTATGAGATCTTGGAAAAACCTGCCACAAGTTGCATCATAGGAATATGCAGCATGATTTGGTTCTACATACAGAAGAAAAATATTGGGTATTCACATGTGGGTCTGAGTTATGAGACCGCTGTAGAAGGGCATCATTGGAGGATAATTACTTCTGCTTTTTCTCATATTAGTGTTATTCATCTTGTTTTTAATATGAGTGCACTTTGGAGTCTTGGGGTGGTAGAGCAGCTTGGTCACTTGGGCCTTGGTGTTGAGTACTACTTGCAGTACACACTTGTGTTGGTTGTTCTATCAGGAGTGCTGGTTCTTGCAATGTATCATTTGTTGATTCAAAGGTTCAAGCTTGAGTATTTTCGTCGAGTGACGGCTGTTGGGTATTCCTGTGTTGTTTTTGGGTGGATGACAATTCTTTCTGTGAAGCAACCATCTTCCAAGTTGGATCTCTTTGGTTTTCTTTCTCTTCCTATCAGTTTTGCGCCGTTTGAATCGCTTATTTTCACTTCGATCATTGTTCCTCAGGCGAGTTTTCTTGGCCATTTATCGGGCATTGTTGTTGGATATGCTATAGCATGGGGTTTGATTCATGGGATGAGCAATTACTGGGCACTTTCCTTGTTGGGATGGATTGCGCTTGTCTTTGTTTTGAGTTTGAAGAGATCTGGTGCCGTTGACCTAAACTTTCTTGAGATTGAATCTGTTACAGATCCTTCCCTACCATCTGTGCGGTTTTTGGCATCAAACAGTGGCAGAACACTGCAGATGAGTGCGTTGCCAAATGGAAATGTTGAAATTGTCTAA 816 0.4167 MGKPLFYEILEKPATSCIIGICSMIWFYIQKKNIGYSHVGLSYETAVEGHHWRIITSAFSHISVIHLVFNMSALWSLGVVEQLGHLGLGVEYYLQYTLVLVVLSGVLVLAMYHLLIQRFKLEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQASFLGHLSGIVVGYAIAWGLIHGMSNYWALSLLGWIALVFVLSLKRSGAVDLNFLEIESVTDPSLPSVRFLASNSGRTLQMSALPNGNVEIV 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00459 271 Pfam Rhomboid family 48 201 IPR022764 GO:0004252|GO:0016021
Gma12g00459 271 SUPERFAMILY Rhomboid-like 13 199 IPR035952 -
Gma12g00459 271 Gene3D - 10 199 IPR035952 -
Gma12g00459 271 PANTHER RHOMBOID PROTEASE 1 271 - -
Gma12g00459 271 PANTHER RHOMBOID-LIKE PROTEIN 13 1 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00459 Gma-Chr12 3766491 3767942 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00459 - - gmx:100818954 528.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00459 12 3766491 3767942 Gma12g00459 12 3766491 3767942 ECH
Gma12g00459 12 3766491 3767942 Gma11g01160 11 9776800 9777546 GST