Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00451 ATGGCCATCCCCAAAGGCACCACTATTGGCTTAGCATCTATTATTGTGATTATAGCATTAATTCTCCACCAAACCGTGGCACAAGCTGTGTCTCCCAATGGTTCCGTTGCAAATAATGTATCAAAACCCATTAAGCCGGACAATACTGTTAGAGTAGATCCATTAGATCATTTAAAAAAATACAGAGGAGGATTTGACATCACCAATAAGCATTATTGGAGTTCAGTTTTCTTCACAGGAATATATGGATATGCAATTGGGGTGCTTTGGCTTTTATGTGGAATGGTGTGTGGATTCTTTTTGTTAACAATCAAATTTTGTTGCCAAAGTGATGGAGGAAGAAGGACCAAGAAAATTCTTTCTTGTAATTATATGAGTTGTGATTTTTCGCCAATTCCTCTGGCTATATCATTCATGATATTAATTATGGTTGCCAGTGTGTTAGTTTATGTTGGGAGTTCAAAATTCCATTATCAAGCAAGGACTTCAGTTAATGTTATAATCAAGATAGCAGATGATGCATCAGAAATCATACACAATGTAACAAGAGCATTAGAAGACATCCAAGAAAACTTGGTGGATTCCGGTATTAGTGCTGAGGTTTCTGAAAATCTTAACTCCACGGCTAAGAAAATGGATAATGCTGTTGATAATATCGTAAAGAAAACTAGGAAAAATAAGCGCACTGTTAACAGGGCTTTCAAATTTGTGTTTATAATAACCATTGTGATCATAAGCTTGAATTTAGTTGCAGTACCAATTTTGTCAGTTTTTGGAGTACACATGTTTTGGAGGGCATTTTACCTGTTTGTTATACTGTGCTGGCTGATGGCGGTGATATGCTGGCTAATCTTTGGATTGTATTTCTTCTTAGAAAATTTTTCTATTGATACGTGCACAGTTCTTTGCAACTTCGAAGAAAATCCATATAATAACAGCCTAACCTCCATCCTCCCTTGTGACGAATTGCGCTCAGCGAAAGCAATTCTCCCTGAAGTTGGTGCAGGGATCTCCTTCCTCATCACTAAGGTGAATTCAAACTTGGGGCCAATGTTTCCAAATAATGTTGATCTGTGCAACCCTTTCTCAGCACCACCTAAATATTTATATCAGCCAGAGTTTTGCCCACCTAATAGTATTCAAATAGGGGATATCCCCAAGGTATTGAAGCCTTATACCTGTTTTGGTGATAGTGATGAAAATTGTGGCAGTGATCATTTAATGAATGGAGGTGAATATAAGGTAGTTGAGGCTTACACAAGTTCAACTCAGAACTTATTGAATATGTACCCTGCCTTGATTGTTAATTCTCCAATGCCTCGTTACAAGGACGAATCCCCTGCAGTTCGGGTCTACACTGTTTGTGATGAATCCAGATATTTGATTGTGAGGAACGTTCCAGAACTAGGTTGTGGGGATGAGTTGCTGAAATTGTTTTCTTCCTATGGAGAAGTCGAGGAGTGTAAGCCAATGGATGCAGAGGACTGTGAGAAATACACTGATGTATTTTGGATCAAATTCCGCCTTGTCAACAATGCCAGGTTTGCAAAAAGAAAATTGGACGATTTTGTTTTCTTTGGGAATAAACTGCAGGTTTCTTATGCTCCCCAATTTGAGAGCCTGTCTGACACAATGGATAAGTTAGAGGGAAGAAGAAGGGAGGTTTTAGCACGATTGAACCCTAGAAGATCTAAAGAGACCACAGCCTCAAGCTCTAAGCCCCGGATTACATCAAAGACCAATTGCTCACAACATTTAGATTCTAATGCAAGGGATGTAGAGCTCAAAGGAGGTTCACACAGTGGTAATTTTCCAATAAGAATGGTTTCCTCTAATGAGGATTATTTTGCTTCAAATTCCATGAATCAAACAGTGAGTCTTGTGCGGGATAAGCTTGATAAGATTCAATCAAGTGGTGAGAATACAAAAGCTGGATCTGCATCAAAGAAACAACGAGTTGATAATAGGAAGAGAATTTAA 1980 0.3848 MAIPKGTTIGLASIIVIIALILHQTVAQAVSPNGSVANNVSKPIKPDNTVRVDPLDHLKKYRGGFDITNKHYWSSVFFTGIYGYAIGVLWLLCGMVCGFFLLTIKFCCQSDGGRRTKKILSCNYMSCDFSPIPLAISFMILIMVASVLVYVGSSKFHYQARTSVNVIIKIADDASEIIHNVTRALEDIQENLVDSGISAEVSENLNSTAKKMDNAVDNIVKKTRKNKRTVNRAFKFVFIITIVIISLNLVAVPILSVFGVHMFWRAFYLFVILCWLMAVICWLIFGLYFFLENFSIDTCTVLCNFEENPYNNSLTSILPCDELRSAKAILPEVGAGISFLITKVNSNLGPMFPNNVDLCNPFSAPPKYLYQPEFCPPNSIQIGDIPKVLKPYTCFGDSDENCGSDHLMNGGEYKVVEAYTSSTQNLLNMYPALIVNSPMPRYKDESPAVRVYTVCDESRYLIVRNVPELGCGDELLKLFSSYGEVEECKPMDAEDCEKYTDVFWIKFRLVNNARFAKRKLDDFVFFGNKLQVSYAPQFESLSDTMDKLEGRRREVLARLNPRRSKETTASSSKPRITSKTNCSQHLDSNARDVELKGGSHSGNFPIRMVSSNEDYFASNSMNQTVSLVRDKLDKIQSSGENTKAGSASKKQRVDNRKRI 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00451 659 CDD RRM_RBM48 449 548 IPR034264 -
Gma12g00451 659 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 31 432 IPR040283 -
Gma12g00451 659 MobiDBLite consensus disorder prediction 635 659 - -
Gma12g00451 659 PANTHER OS11G0264500 PROTEIN 31 432 - -
Gma12g00451 659 MobiDBLite consensus disorder prediction 559 588 - -
Gma12g00451 659 SUPERFAMILY RNA-binding domain, RBD 444 539 IPR035979 GO:0003676
Gma12g00451 659 Coils Coil 171 191 - -
Gma12g00451 659 MobiDBLite consensus disorder prediction 563 588 - -
Gma12g00451 659 Gene3D - 454 549 IPR012677 -
Gma12g00451 659 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 459 537 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00451 Gma-Chr12 3679351 3686472 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00451 - - pvu:PHAVU_011G052700g 541.962