Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00426 ATGTGGTGGTGTTTGGACACGGTGCTGAGGATGTTTGGTGCTGGTTGGGCCGGTGAGGGGTCTCATGCTCGCATATCTGAAGTTGACACTGATCGTGATATTGCGTTCAAATTTGACTGCGCGTCTATATCTGCCTTCATTATTGGCTCCTTTTTGATTACGAAAATGTGGAAGAGAACGGGTTTTGAAGAAGAAGCAGTTCAATTGATCAACTCAGATTTCAGGGACCTAAGTCTAGCTGCTAATAGACTCGCCCATCATGCCATCAAACTTGGTGGCATTGGCTTTGGAGCCTCTTTTTTCGGATTGTTTGCTGCCATTGCTGCTATttatctgttgattttggatcgtacaaactggaaaacaaatattctcacagcactactcattccatacattttcttcagcttgccttcattaattttcgacgtcttcaggggagagcttggaaaatggattgctgcagttgctgttgtattacgccttttccttccaagacacttccctgattggctggaattgcctgACTTGATGAGGGAACAAGCACTAGGCCCAAAATGGCTTGATAAAAAAAAGGAGCAAAAGCACATGTTCCAAGGCCACGAAACATCAAGCTTATCAGAATTTCCAACTATCATTTTGTAA 645 0.3054 MWWCLDTVLRMFGAGWAGEGSHARISEVDTDRDIAFKFDCASISAFIIGSFLITKMWKRTGFEEEAVQLINSDFRDLSLAANRLAHHAIKLGGIGFGASFFGLFAAIAAIYLLILDRTNWKTNILTALLIPYIFFSLPSLIFDVFRGELGKWIAAVAVVLRLFLPRHFPDWLELPDLMREQALGPKWLDKKKEQKHMFQGHETSSLSEFPTIIL 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00426 214 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 1-RELATED 56 176 - -
Gma12g00426 214 Pfam Cold acclimation protein WCOR413 64 176 IPR008892 GO:0016021
Gma12g00426 214 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2 56 176 IPR008892 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00426 Gma-Chr12 3494749 3502418 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00426 - - gmx:100811430 176.792
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00426 12 3494749 3502418 Gma12g00426 12 3494749 3502418 ECH
Gma12g00426 12 3494749 3502418 Gma11g01122 11 9468404 9471230 GST