Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00423 ATGGATGGACTACCTGGCTCTGTGGGCACCAGCGCTAGCTTCAGTCTGAGATTGGGTCAGACCATGTTCTCTTCTGCTTCCCTTCTCTTTATGTCTCTGGGGGTTGAATTCTACAGCTACACGGCTTTCTGCTATTTGGTGACAATTATGGGGTTGGTTATACCATGGAGTTTCACATTAGCATTGGTAGATGGATATTCTGTTCTGGTCAAATGCCCCATTCGTCAACCAGGAATACTGTTGATTATTGTTGTGGGAGATTGGGTATTATCAACCCTCACACTAGCAGCAGCTTGCTCAACAGCTAGTGTTGTGGATCTCCTTCTCAACACCCATGGGTCTTTTTGCCCTCCAAAGCTTTGTAGCAGGAGCAAAGTACATCTCGAGTGCAATGAAAGTCATGCTCAGCTTCATAGCAGGTACACAAAATCGACAGACAAAATAAACAGTTGA 453 0.4525 MDGLPGSVGTSASFSLRLGQTMFSSASLLFMSLGVEFYSYTAFCYLVTIMGLVIPWSFTLALVDGYSVLVKCPIRQPGILLIIVVGDWVLSTLTLAAACSTASVVDLLLNTHGSFCPPKLCSRSKVHLECNESHAQLHSRYTKSTDKINS 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00423 150 PANTHER CASP-LIKE PROTEIN 5C3 1 127 - -
Gma12g00423 150 Pfam Casparian strip membrane protein domain 9 121 IPR006702 -
Gma12g00423 150 PANTHER CASP-LIKE PROTEIN 5B3 1 127 IPR045009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00423 Gma-Chr12 3469277 3471920 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00423 - - gmx:100791311 232.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00423 12 3469277 3471920 Gma12g00423 12 3469277 3471920 ECH
Gma12g00423 12 3469277 3471920 Gma11g01119 11 9443821 9446366 GST