Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00410 ATGGCTGTTCTTACACCCGTAAGTTCTTGCTTTGGAGCAAAGTATCAGGCTCTAGCACCATTGAGAATTTTAAGGGGTCTGGTGTGTCTACTGGTGCTGCTTTCAACAGCATTTATGATGTTAGTATTCTTTGGTTTTATAAGTGCTGTTGTAGTGCGAGTTTTTAGCGTCAGTTACAGCAGGAGAGCAACTTCCTTTATCTTTGGTGCTTGGTTAGCCTTGTGGCCTTTTCTATTTGAAAAGATCAACAAGACTAAAGTTGTGTTTTCTGGAGATATTGTTCCTTCAAGAGAACGAATCTTATTGATCGCAAATCATAGAACTGAGGTTGACTGGATGTATCTATGGGACCTTGCCTTGCGGAAGGGATGCCTTGGATACATAAAATATATACTTAAGAGCAGCTTGATGAGGCTTCCAGTTTTTGGTTGGGCATTTCACATACTAGAGTTCATCCCAGTGAAAAGAAAGTGGGAGGCTGATGAATCAATCATGCGCCATATGCTTTCTACATTCAAGGATCCACAAGATCCTCTCTGGCTTGCGCTTTTCCCAGAAGGCACTGATTTCACTGAGCAAAAGTGCCTTCGGAGTCAAAAATATGCTGCTGAACATAAGTTACCGGTTCTGAAAAATGTTTTACTTCCAAGGACAAAGGGCTTCTGTGCCTGCTTGCAAGAGTTGAGGAGCTCTCTCACTGCAGTTTATGATGTAACCATTGGCTACAAATACCGCTGCCCATCTTTCTTGGATAATGTCTTTGGGGTGGATCCTTCTGAAGTTCATATTCATATCCATCGCTTCCCCCTTGACAGTATCCCGGTATCTGAAGATGAAATTTCCATGTGGTTGATAAATAGATTCCAGACAAAGGATCAGTTACTTTCCAATTTTCAAACTCAAGGTCAGTTTCCAGATCAAGCATCAGAAAGGGACCTCTCTGCTGTTACGAGCATTTTAAATTGTATGACAATTGTTACAGTGACAGGTACAATGATGTACTACAGTTTTGCCTCTTTCTGGTTTAAACTTTATGTGTCTCTAGTCTGTGCGTATTTGGTTCCGGCCACATATTTCAATACTCGGCCGCAGCCCATTCTTAGCTTTTTGAAGATGAGAGCAAGGTAG 1128 0.4167 MAVLTPVSSCFGAKYQALAPLRILRGLVCLLVLLSTAFMMLVFFGFISAVVVRVFSVSYSRRATSFIFGAWLALWPFLFEKINKTKVVFSGDIVPSRERILLIANHRTEVDWMYLWDLALRKGCLGYIKYILKSSLMRLPVFGWAFHILEFIPVKRKWEADESIMRHMLSTFKDPQDPLWLALFPEGTDFTEQKCLRSQKYAAEHKLPVLKNVLLPRTKGFCACLQELRSSLTAVYDVTIGYKYRCPSFLDNVFGVDPSEVHIHIHRFPLDSIPVSEDEISMWLINRFQTKDQLLSNFQTQGQFPDQASERDLSAVTSILNCMTIVTVTGTMMYYSFASFWFKLYVSLVCAYLVPATYFNTRPQPILSFLKMRAR 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00410 375 CDD LPLAT_LCLAT1-like 76 266 - -
Gma12g00410 375 Pfam Acyltransferase C-terminus 254 320 IPR032098 -
Gma12g00410 375 Pfam Acyltransferase 91 243 IPR002123 GO:0016746
Gma12g00410 375 SMART plsc_2 100 222 IPR002123 GO:0016746
Gma12g00410 375 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 5-RELATED 1 373 - -
Gma12g00410 375 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 34 214 - -
Gma12g00410 375 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 1 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00410 Gma-Chr12 3367638 3369912 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00410 14 365 Miscellaneous Gene Families AT1G75020 61.473 3.26e-162 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00410 K13513 - gmx:100814885 739.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00410 12 3367638 3369912 Gma12g00410 12 3367638 3369912 ECH
Gma12g00410 12 3367638 3369912 Gma11g01103 11 9322226 9324542 GST