Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00409 ATGGGGAGTCATATGAGCAAGAGGATCCCTGAAACTTCTTCTTCTATTGGCCTCAGCACCGAATTGCACTACAAAACTGAGTTGAGTTCCTATGAAGCTGCTTGCAAGCTTGATTCTGATTTGCAGTTCTTTGACACCACACTTCAAGCTAGAGCAAATCAAGTTATCAACACTCTTGCTGTTGGTGTTGAAGTTCGAGCCCTTTCATTCGATTCTCTAAAGCAAATCACAGAATGCCTTCTGGAGATGAACCAGGAAGTTGTCAAGGTAATCTTGGACTGCAAGAAAGACATTTGGAAGAGCCAGGAACTGTTTGAACTGGTTGAGGAATACTTTGAGAATAGTTTGAAAACTTTGGACTTCTGCACTGTATTGGAGAAGTGCCTAAAGCGCGCTCGCGACAGCCAATTGCTTATTCATGTAGCTGTTCAACAGTTTGAGGAAGAATCAGGATCAGGAGACAATCGCTATGCGAGGACATTGCAAGAATTTAAGAATTTCAAGGCAGCTGGTGACCCTTTCACCGAAGAGTTTTTCCAGATATTTCAGTCTGTTTACAAGCACCAGATACTCATGCTTGAAAAGTTGCAACTTAGGAAGAACAAGCTTGATAAGAAGCTAAAATACATCCATTCATGGAGGAAGGTTTCGAGTATGATCTTTGTGGctacatttgctgcagtcttgatctgctcggttgtagcagcagccattgcagcaccacctgttgctgctgcgatagctgctGCTACGTCGATCCCAATCGGATCCATGGGGAAGTGGATTGACTCGCTCTGGAGGAACTATGAAAATGCATTGAAGGGACAGAAGGAAGTGATTAGCTCAATGCAGGCCGGTACCTATGTTGCCATAAAGGACTTAGACAACATTAGGATTCTCATTGATAGGCTTGAAATTGAGATTGAGTCTCTATTGCATAATGTAGATTTTGCAATTGAAGAAGAAGCTGTGAAGGTTGCAATAGAGGAGATCAAGAAGAAGCTTGGAGTGTTTATGAAGAATGTTGAAGATTTGGCAGTTCAAGCTGATATGTGTAGCCGTGACATTAGGAGGGCAAGGACTGTGGTCCTGCAGAGAATCATAAAGCATCCCCACAATTGA 1122 0.393 MGSHMSKRIPETSSSIGLSTELHYKTELSSYEAACKLDSDLQFFDTTLQARANQVINTLAVGVEVRALSFDSLKQITECLLEMNQEVVKVILDCKKDIWKSQELFELVEEYFENSLKTLDFCTVLEKCLKRARDSQLLIHVAVQQFEEESGSGDNRYARTLQEFKNFKAAGDPFTEEFFQIFQSVYKHQILMLEKLQLRKNKLDKKLKYIHSWRKVSSMIFVATFAAVLICSVVAAAIAAPPVAAAIAAATSIPIGSMGKWIDSLWRNYENALKGQKEVISSMQAGTYVAIKDLDNIRILIDRLEIEIESLLHNVDFAIEEEAVKVAIEEIKKKLGVFMKNVEDLAVQADMCSRDIRRARTVVLQRIIKHPHN 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00409 373 PANTHER UPF0496 PROTEIN 1 1 370 - -
Gma12g00409 373 Coils Coil 294 321 - -
Gma12g00409 373 Pfam Protein of unknown function (DUF677) 41 367 IPR007749 -
Gma12g00409 373 PANTHER UPF0496 PROTEIN 3-RELATED 1 370 IPR007749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00409 Gma-Chr12 3363328 3364449 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00409 - - gmx:100811667 652.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00409 12 3363328 3364449 Gma12g00409 12 3363328 3364449 ECH
Gma11g01102 11 9317903 9319729 Gma12g00409 12 3363328 3364449 ECH
Gma12g00409 12 3363328 3364449 Gma11g01102 11 9317903 9319729 GST