Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00407 ATGTCGAAGTTAATCTTCGTGTTCCTTGCACTAATTCCTCTTCTCTGCACCTCCTTCTCGCCAGAGAAACCCTCAGATCGGCGCGTCCTCGTTTTGCTCGATGACTTCGCCATCAAATCCTCTCACTCTCTCTTCTTCAACTCCCTCAAATCTCGCGGCTTCGATCTCCAATTCCACCTCGCCGACGACCCCAAAATTGCGCTCCAGAGATACGGCCAGTACCTCTACGACGCCCTAATTCTCTTTTCCCCCACCATTGAACGTTTTGGAGGATCCATTGACGCGGCTGCAATTTTGGATTTTGTTGATTCGGGTCATGATTTGATCGTTGCTGCTGATAGCAATGCATCTGATTTAATCAGGGAAATAGCCACCGAGTGTGGAGTGGACTTTGATGAGGATCCTGCTGCTGTGGTTGTGGATCATTCGGCATATGCAGTCTCTGCTACTGAAGGAGATCATACATTGATTGCTAGTGATGATTTTATCAAGTCTGACGTCATATTTGGAAGCAAAAAAATTGAGGCTCCAGTACTTTTCCAGGGGATTGGGCATTCACTAAATCCTACCAATAGCCTGGTGTTGAAAGTTCTCTCTGCATCTCCTTCAGCCTTTTCTGCTAACCCAAAATCTAAAGTGACAAGTCCTCCATCACTCACTGGAACTTCAATCTCATTAGTTTCAATTATACAGGCAAGAAATAATGCCCGGATATTGATCTCTGGCTCATTGAGCTTGTTCAGCAACCGATTTTTCAGGTCAGGTGTGCAGAAGGCTGGGAGTCCAACCAAACATGAGAAGTCAGGTAATGAGCAGTTCTTGAATGAACTTAGCAAATGGATTTTCCATGAACGAGGTCACCTCAAGGCGGTGAATGTGCAACACCACAAAGTTGGGGAAGCTAATGAACCAGCCATCTATCGGATCAATGATAATTTGGAATACTCTGTTGAAGTTTATGAGTGGTCTGGGACAGCATGGGAACCTTACGTAGCTGATGATGTTCAAGTGCAATTTTACATGATGAGCCCCTATGTCTTGAAGACTTTATCAACTGATGGCAAGGGCCGTTATTTTACATCATTTAAGGTTCCAGATGTCTATGGGGTTTTCCAATTCAAAGTTGAGTACGAAAAACTTGGATATACAAGCTTATCTTTATCAAAGCAGATTCCTGTTCGTCCCTTTAGACACAATGAATATGAAAGATTTATACCAGCAGCCTATCCCTATTATGGAGCATCATTTTCAATGATGGTGGGTTTCTTCATCTTCACTGCAGTTCATCTATACAGCAAGTAG 1302 0.437 MSKLIFVFLALIPLLCTSFSPEKPSDRRVLVLLDDFAIKSSHSLFFNSLKSRGFDLQFHLADDPKIALQRYGQYLYDALILFSPTIERFGGSIDAAAILDFVDSGHDLIVAADSNASDLIREIATECGVDFDEDPAAVVVDHSAYAVSATEGDHTLIASDDFIKSDVIFGSKKIEAPVLFQGIGHSLNPTNSLVLKVLSASPSAFSANPKSKVTSPPSLTGTSISLVSIIQARNNARILISGSLSLFSNRFFRSGVQKAGSPTKHEKSGNEQFLNELSKWIFHERGHLKAVNVQHHKVGEANEPAIYRINDNLEYSVEVYEWSGTAWEPYVADDVQVQFYMMSPYVLKTLSTDGKGRYFTSFKVPDVYGVFQFKVEYEKLGYTSLSLSKQIPVRPFRHNEYERFIPAAYPYYGASFSMMVGFFIFTAVHLYSK 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00407 433 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE 48 KDA SUBUNIT 4 433 - -
Gma12g00407 433 Pfam Oligosaccharyltransferase 48 kDa subunit beta 28 433 IPR005013 GO:0005789|GO:0018279
Gma12g00407 433 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE 48 KDA SUBUNIT 4 433 IPR005013 GO:0005789|GO:0018279
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00407 Gma-Chr12 3344964 3349655 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00407 K12670 - gmx:100806848 854.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00407 12 3344964 3349655 Gma12g00407 12 3344964 3349655 ECH
Gma11g01100 11 9297916 9304538 Gma12g00407 12 3344964 3349655 ECH
Gma12g00407 12 3344964 3349655 Gma11g01100 11 9297916 9304538 GST