Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00404 ATGATTGGGCGCAGAGACAGAGAGGGACCCTTGATGAGGAACAACAGTACTAACTCTCTTCGCAAATCACGGGTCCTAACCGCAGTTGCAATTGGTGTCCTTGTTGGATGCGTCTTCGCTTTCTTGTTCCCCAATGGCTTCTTCGTTTCTGACTCTGCTGCCACTAATCATCATCTCCCTCTCGCGGGATCTAAGACCCAGGAAAATTCAGCTGGATGTGAATCCACGGATCGGGTCAACATGTTGAAATCAGAGTTTGTGGCGGTATCAGAGAAAAATGCTGAGCTTAAAAAACAGGTGAGGGAATTGACTGAAAGGCTTCGGCTTGCAGAGCAAGGGAAAGACCAGGCTCAAAAGCAGTTCCTTACATTAGGAAAACAACCTAAAGCTGGACCTTTTGGTACTGTAAAGGGATTAAGAACCAACCCTACTGTTGTTCCTGATGAATCTGTAAATCCAAGATTGGCAAAGATATTAGAGAAAGTTGCAGTCAAACGAGAGCTTATAGTTTGTCTTGCAAACACCAATGTGAAGGAGATGCTGGAGGTCTGGTTCACCAATATCAAGAGAGTTGGCATAACCAATTATCTAGTTGCTGCTTTAGACGATGAGACTGCAAAGTTTTGTGAATCAAATCAAGTCCCAGTGTATAAAAGAGATCCAGATGATGGTGTTGATATCATTGGAAGAACAGGGAGCAACCATGCTGTCTCTGGTCTTAAATTTCGTATTCTAAGAGAATTTTTGCAGTTGGGATATAGCGTTCTTCTATCAGATGTTGATATTGTACATTTGCAGAATCCTTTTGATCATCTATACCGTGATTCAGACGTGGAGTCCATGAGTGATGGTCATGATAACATGACAGCTTATGGCTATAATGATGTGTTTGATGAGCCTACAATGGGTTGGGCTCGATATGCTCATACAATGAGGATATGGGTTTATAACTCTGGATTCTTCTATATCAGACCAACAATCCCTTCAATTGAGCTTTTGGACCGCGTGGCAACACGACTTTCAAAGGAGAAAGCATGGGACCAGGCGGTTTTCAATGAGGAACTGTTTTACCCCTCATTTCCTGGTTATGATGGGCTTCATGCTGCCAGAAGAACTATGGATATGTATCTCTTCATGAATAGCAAGGTTCTGTTCAAGACAGTGAGGAATGATGCTAACCTAAGCAAATTGAAGCCAGTAATTATTCATGTGAATTACCAACCTGATAAGCTTCCCCGAATGAAAGCAATTGTTGAATACTATGTTAATGGGAAGCAAGATGCTCTCAAACCTTTCCCTGATGGCTCAGATTGGTAA 1317 0.4244 MIGRRDREGPLMRNNSTNSLRKSRVLTAVAIGVLVGCVFAFLFPNGFFVSDSAATNHHLPLAGSKTQENSAGCESTDRVNMLKSEFVAVSEKNAELKKQVRELTERLRLAEQGKDQAQKQFLTLGKQPKAGPFGTVKGLRTNPTVVPDESVNPRLAKILEKVAVKRELIVCLANTNVKEMLEVWFTNIKRVGITNYLVAALDDETAKFCESNQVPVYKRDPDDGVDIIGRTGSNHAVSGLKFRILREFLQLGYSVLLSDVDIVHLQNPFDHLYRDSDVESMSDGHDNMTAYGYNDVFDEPTMGWARYAHTMRIWVYNSGFFYIRPTIPSIELLDRVATRLSKEKAWDQAVFNEELFYPSFPGYDGLHAARRTMDMYLFMNSKVLFKTVRNDANLSKLKPVIIHVNYQPDKLPRMKAIVEYYVNGKQDALKPFPDGSDW 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00404 438 Pfam Nucleotide-diphospho-sugar transferase 193 411 IPR005069 -
Gma12g00404 438 SUPERFAMILY Nucleotide-diphospho-sugar transferases 169 367 IPR029044 -
Gma12g00404 438 Coils Coil 79 120 - -
Gma12g00404 438 PANTHER ARABINOSYLTRANSFERASE RRA1-RELATED 13 435 - -
Gma12g00404 438 PANTHER ARABINOSYLTRANSFERASE RRA3 13 435 IPR044290 GO:0016757|GO:0080147
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00404 Gma-Chr12 3316463 3318766 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00404 K20783 - gmx:100804189 884.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00404 12 3316463 3318766 Gma12g00404 12 3316463 3318766 ECH
Gma12g00404 12 3316463 3318766 Gma11g01095 11 9259331 9262731 GST