Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00401 ATGGCTCCTACTCTTGCCCTTCAGTTTCTTTCTCTTTTCCTTTTGTTCATTATGAATGGCTATGTCATTGGAGCTAGAGATATGAAGGTAGAACTGCGAGATCAGAAGCAAGTGGAATGGTACAAAGCCACATCAGTGTCCAATGACGAGTCTAATGGCAAAGGGTACATAACCACTTCAGAATCCGCTGAACCTAATTACATAGCTTCATATACTGCTGCTAAACACAACCAAAACCATGAAAAACTCCATCAACCTTACATAGCTGGGTACACAAGTGATGCTGCCAACAAAGCCAATCAAtacatagcagggtataggaccaaaactcatgattccaatacaccttacatagctgggtacacaacaaccagtgcttcccacaaagccaatcaacctaattaccttgcagggtataggaccaaaaccgatgattccaatacaccctacatagctgggtacacaacaactaatgcccatgtggcaaataatcaacctaattacattgcagggtataggactagcaccacccaagaatccaatacaccttcttacattgcagggtataggactagcaccacccaagaatctaatacaccttacattgcagggtataggactagaaccacccatgatcccaatgcaccttacatagctgggtaCACAACAACTAGTGCCAAGAAAGCTCCAAAAGGGTCATCTCATGATGATACCACTGGACCTTACATAACCCAATATGGTGGACCCGGTCCCAAAAATGACCCAAAAGAATCTTCCAACTTGGACCATACAGAGGCTTTCAAGACAGGATTTTTCGCCTTGGATGATCTATATGTTGGGAATGTGATGACCCTCCAATTTCCAATTCAAGATGTTTCTCAATTCTTACCAAGAAAAGAGGCTGAGTCCATTCCTTTCTCAATCTCACAACTCCCCAGTGTTCTTCAACTCTTCTCAATCTCTGAAGATTCTCCTGAGGCCAATGCCATGAGAGACACACTTGAACAATGTGAAGCAGAACCCATCACAGGGGAGACCAAGATTTGTGCCACCTCTTTAGAGTCCATGCTTGAATTCATTGGCACAATCATTGGTTCAGAGACCAAGCATAATATTCTCACAACCACACTTCCCACAGCCTCAGGTGTCCCTCTACAAAAGTTCACCATTTTGGAAGTGTCTGAAGATATCAACGCTGCTAAATGGGTAGCTTGTCATCCCCTACCATATCCCTATGCCATTTACTATTGCCACTTCATAGCAACAGGGAGCAAGGTGTTCAAGGTCTCACTAGGTAGCGAGAATGGAGATGACAAAATTGAAGCTCTTGGCATTTGCCATTTGGACACATCTGATTGGAGCCCAAATCATATTATATTTAGGCAGCTTGGAATCAAGCCTGGGAAGGATGCAGTGTGCCACTTCTTCCCTATAAAACATCTTATGTGGGTTCCCAAGCCTTTACAAGCCACCATGTGA 1479 0.3286 MAPTLALQFLSLFLLFIMNGYVIGARDMKVELRDQKQVEWYKATSVSNDESNGKGYITTSESAEPNYIASYTAAKHNQNHEKLHQPYIAGYTSDAANKANQYIAGYRTKTHDSNTPYIAGYTTTSASHKANQPNYLAGYRTKTDDSNTPYIAGYTTTNAHVANNQPNYIAGYRTSTTQESNTPSYIAGYRTSTTQESNTPYIAGYRTRTTHDPNAPYIAGYTTTSAKKAPKGSSHDDTTGPYITQYGGPGPKNDPKESSNLDHTEAFKTGFFALDDLYVGNVMTLQFPIQDVSQFLPRKEAESIPFSISQLPSVLQLFSISEDSPEANAMRDTLEQCEAEPITGETKICATSLESMLEFIGTIIGSETKHNILTTTLPTASGVPLQKFTILEVSEDINAAKWVACHPLPYPYAIYYCHFIATGSKVFKVSLGSENGDDKIEALGICHLDTSDWSPNHIIFRQLGIKPGKDAVCHFFPIKHLMWVPKPLQATM 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00401 492 MobiDBLite consensus disorder prediction 225 259 - -
Gma12g00401 492 ProSiteProfiles BURP domain profile. 271 486 IPR004873 -
Gma12g00401 492 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 4 491 IPR044816 -
Gma12g00401 492 PANTHER BURP DOMAIN PROTEIN 4 491 - -
Gma12g00401 492 SMART BURP_2 269 486 IPR004873 -
Gma12g00401 492 Pfam BURP domain 271 485 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00401 Gma-Chr12 3286564 3289650 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00401 - - gmx:100787424 929.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00401 12 3286564 3289650 Gma12g00401 12 3286564 3289650 ECH