Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00394 ATGGCTACACTTTCCAACCCTTCATTCCTCCTCTACCTTTCCCTGATCATCACTGCAATGTGCTTTGCTGTTTCGCAGCCCTTCATCGGCGTGAACTACGGCCAGGTCGCCGACAACCTTCCGGCGCCGGAGGCCTCGGCGGAGCTCCTCAAGTCCACGACCGTCGGAAAAGTCCGTCTCTACGGCGCCGATCCGGCGATAATCAAGTCCCTGGCGAACTCCGGCATCGGAATCGTGATCGGCGCGGCCAACGGCGACATTCCGAGTCTGGCCTCCGATCCCGACTCGGCGACTCAGTGGGTTAACGCGAACGTGTTGCCCTACTACCCCGAAAGCAACATCACTATGATCGCCGTGGGCAACGAGGTCATGAGCTCCGGCGACGAGAGCCTCGTCTCGCAGCTTCTCCCGGCGATGCAAAATGTCCAGAATGCCCTCAACTCGGCGCCAAAAATAAAGGTTTCCACAGTGCACTCGATGGCCGTGTTGACTCACTCGGATCCTCCATCATCCGGGTCATTCGACCCGGCTCTCGTAAACACCCTCCAACAGTTGCTCGCGTTTCAGAAAGATAACGAATCACCCTTCGCCTTCAACCCGTACCCGTTCTTTTCTTACCAGAGCGACCCGAGACCCGAAACACTCGCGTTTTGTCTTTTTCAACCGAATTCGGGTCGGGTCGATACGGGTAGTGGGAAGGTTTATTCTAACATGTTTGATGCTCAGGTGGATGCAGTGCATGCTGCTTTGAGCAGTATGGGATTCAAGGACATGGAGATTGTGATTGCTGAGACAGGATGGCCCTCTCGTGGGGACAGCAATGAAGTAGGAGCAAGTGTTGAAAATGCCAAGGCCTATAACGGGAACCTCATTGCGCACCTTAGATCACTGGTTGGCACTCCTTTGATGCCAGGCAAATCTGTGGACACATTCATTTTTGCGCTCTATGATGAGGATTTGAAACGTGGTCCAGCATCTGAGCGAGCATTTGGTTTGTTCAAAACTGATCTCACCATGGCATATGATGTTGGCCTAGACAAGTCTGGTTCTACCCACAAGAATCCACCAACTAGTCCTGTTACTCCAGCTCCTAAAATGGGAACACAATGGTGCATCCCCAAAGTGGAAGTGACTGAGGCTCAATTGCAGGCAAATATTGATTATATTTGTGGTAGCCAAGTTGTAGATTGTGGGCCAATTCAACCAGAAGGTGCTTGTTATGAACCTAACACGATATCATCTCATGCCGCCTTTGCTATGAATCTCTACTACCAGAAGTTTGGCAGAAATCCATGGAACTGTGATTTCTCTCAAACAGCTATGCTTACATCCCAAAATCCAAGTTACAATGCTTGTGTTTATCCCGGTGGGAGTACCTGA 1380 0.513 MATLSNPSFLLYLSLIITAMCFAVSQPFIGVNYGQVADNLPAPEASAELLKSTTVGKVRLYGADPAIIKSLANSGIGIVIGAANGDIPSLASDPDSATQWVNANVLPYYPESNITMIAVGNEVMSSGDESLVSQLLPAMQNVQNALNSAPKIKVSTVHSMAVLTHSDPPSSGSFDPALVNTLQQLLAFQKDNESPFAFNPYPFFSYQSDPRPETLAFCLFQPNSGRVDTGSGKVYSNMFDAQVDAVHAALSSMGFKDMEIVIAETGWPSRGDSNEVGASVENAKAYNGNLIAHLRSLVGTPLMPGKSVDTFIFALYDEDLKRGPASERAFGLFKTDLTMAYDVGLDKSGSTHKNPPTSPVTPAPKMGTQWCIPKVEVTEAQLQANIDYICGSQVVDCGPIQPEGACYEPNTISSHAAFAMNLYYQKFGRNPWNCDFSQTAMLTSQNPSYNACVYPGGST 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00394 459 Gene3D - 365 454 - -
Gma12g00394 459 Pfam Glycosyl hydrolases family 17 29 343 IPR000490 GO:0004553|GO:0005975
Gma12g00394 459 SMART X8_cls 369 454 IPR012946 -
Gma12g00394 459 Gene3D Glycosidases 28 353 - -
Gma12g00394 459 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 12 451 IPR044965 GO:0004553|GO:0005975
Gma12g00394 459 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 7 12 451 - -
Gma12g00394 459 SUPERFAMILY (Trans)glycosidases 29 344 IPR017853 -
Gma12g00394 459 Pfam X8 domain 369 441 IPR012946 -
Gma12g00394 459 ProSitePatterns Glycosyl hydrolases family 17 signature. 258 271 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00394 Gma-Chr12 3218073 3223196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00394 25 455 Miscellaneous Gene Families AT2G16230 64.450 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00394 - - gmx:100778892 713.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00394 12 3218073 3223196 Gma12g00394 12 3218073 3223196 ECH