Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00358 ATGCTCGTGTTGTTTGAAACCCCTGCGGGTTTTGCCCTGTTTAAAGTGCTGGATGAAGGCAAGCTTTCTAAAGTTGAGGACTTGTGGAAGAACTTTTCCAGCGCAGATACTGCTAGACAGGTGGTCAAGTTGAAAGCATTTTCTAAATTTGAGAACACTTCAGAAGCTCTAGAGGCAGCTACTTTACTTATTGATGGAAAAGCTAGCAAGGGTCTGCGCAAGTTCCTGCGTGTTCATTGTGAAAATGAAACACTAGGTGTGGCAGATTCAAAGCTTGGGAATGTGATCAAGGAGAAATTGAAAATTGACTGTATTCACAACAATGCAGTTATGGAGTTGATGAGAGGCGTTAGAAATCAGTTAACTGAACTTATATCTGGTCTAGCTGTTCAAGACATGGCCCCAATGAGCTTGGGTTTATCTCACAGCTTATCCAGATACAAATTGAAGTTTAGTGCAGAGAAGGTGGATACCATGATTGTCCAGGCTATTGGTTTACTAGATGATCTTGATAAAGAGTTGAATACCTATGCCATGAGGGTTCGAGAATGGTATGGTTGGCATTTTCCCGAGCTTACTAAAATAATACAGGACAACATCCTATATGCCAGGGCAGTCAAGTTGATGGGTGATCGTGTTAATGCAGCTAACCTGGATTTCTCTGAGATTTTGCCAGAGGAAGTTGAGGCAGAGCTGAAGGAGGCATCTGTAATATCTATGGGAACTGAAATTGGTGAGCTTGATTTGGCAAATATTAGAGAACTCTGTGACCAGGTTTTGTCTCTCTCGGAATACAGGGCACAACTCTATGATTATTTGAAGAGTAGAATGAACACCATTGCACCCAATTTGACTGCAATGGTTGGGGAGCTTGTTGGTGCTCGCCTCATTGCCCATGGTGGTAGCTTATTAAATCTTGCAAAGCAGCCTGGCAGTACTGTGCAAATTCTTGGTGCTGAGAAGGCTCTCTTTAGGGCACTAAAGACTAAGCATGCTACTCCCAAGTATGGTCTTATATACCATGCTTCCTTGATTGGTCAGGCAGCTCCAAAGTTCAAGGGGAAAATTTCCCGGTCACTTGCAGCAAAGACGGCATTGGCTATTAGGTGTGATGCTCTTGGAGATAGCCAAGATAACACCATGGGATTGGAGAACAGAGCCAAGCTTGAAGCACGATTGAGGAACCTTGAAGGCAAAGAGTTAGGTCGTTTTGCTGGTTCTGCCAAGGGAAAGCCCAAGATAGAAGCATACGACAAGGACCGAAAGAAAGGAGCTGGAGGACTGATAACCCCGGCCAAGACATATAATCCTTCAGCTGATTCAGTTATTGGGCAAATGGTCAATTCTGCTATGGATGAAGATGCACAAGAGCCTTCTGTTGCTGATAaaaagaaagaaaagaaagaaaagaaggaaaagaagaaaaaggagaaaaatgaaggGGATGAAACTGTGCAAGCTGATGGTGACGTTGGTGAGGAACCAGAACCAGAAGTTGTGAAAAAGGAAAAGAAGAAGAAAAGGAAGGAAACTGAGAGTGCTGAGTTGCAGAATGGGAATGACGATAATGCAGGAGAAAAGAAGAAAAAGAGAAAGAAGCATGCCGAGAAGGAAGAATCTCCTGAAATGCCAAGCAAGAAGAAAGGCAAAAAAAAGAAAAGTGGGGACTAA 1671 0.4213 MLVLFETPAGFALFKVLDEGKLSKVEDLWKNFSSADTARQVVKLKAFSKFENTSEALEAATLLIDGKASKGLRKFLRVHCENETLGVADSKLGNVIKEKLKIDCIHNNAVMELMRGVRNQLTELISGLAVQDMAPMSLGLSHSLSRYKLKFSAEKVDTMIVQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIIQDNILYARAVKLMGDRVNAANLDFSEILPEEVEAELKEASVISMGTEIGELDLANIRELCDQVLSLSEYRAQLYDYLKSRMNTIAPNLTAMVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLIGQAAPKFKGKISRSLAAKTALAIRCDALGDSQDNTMGLENRAKLEARLRNLEGKELGRFAGSAKGKPKIEAYDKDRKKGAGGLITPAKTYNPSADSVIGQMVNSAMDEDAQEPSVADKKKEKKEKKEKKKKEKNEGDETVQADGDVGEEPEPEVVKKEKKKKRKETESAELQNGNDDNAGEKKKKRKKHAEKEESPEMPSKKKGKKKKSGD 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00358 556 Gene3D - 129 284 - -
Gma12g00358 556 MobiDBLite consensus disorder prediction 451 556 - -
Gma12g00358 556 MobiDBLite consensus disorder prediction 407 439 - -
Gma12g00358 556 ProSiteProfiles Nop domain profile. 280 398 IPR002687 -
Gma12g00358 556 SUPERFAMILY Nop domain 153 397 IPR036070 -
Gma12g00358 556 Coils Coil 460 484 - -
Gma12g00358 556 Pfam NOP5NT (NUC127) domain 2 66 IPR012974 -
Gma12g00358 556 PANTHER NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58 1 554 IPR045056 GO:0030515|GO:0031428|GO:0032040
Gma12g00358 556 Pfam snoRNA binding domain, fibrillarin 166 394 IPR002687 -
Gma12g00358 556 Gene3D Nop domain 285 397 IPR042239 -
Gma12g00358 556 PANTHER PROTEIN NOP56, PUTATIVE-RELATED 1 554 - -
Gma12g00358 556 SMART NOSIC_2 159 211 IPR012976 -
Gma12g00358 556 MobiDBLite consensus disorder prediction 494 546 - -
Gma12g00358 556 MobiDBLite consensus disorder prediction 456 485 - -
Gma12g00358 556 MobiDBLite consensus disorder prediction 412 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00358 Gma-Chr12 2942279 2947151 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00358 K14565 - gmx:100775301 965.681