Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00344 ATGGCCTCATCCTCACGTGCAAGGAGTAGCTCGCCATTCTCGCACCGCAAACCCTCAACTCCTCTCTCCTCAGCTTCCTCTTCCACTTCTTCCTTCACGAACGGACGCGTAATGCCTCGCTCCTGTTCCTCTTCCACGTCGTCGTTTTACAACTCCGGTGGCGGTGGACGATCCATGACTCCGAGTCGCGGTCACAGCGAGTCTGTCTACTACGGCTACGGTAATCCTTCGCCGGTGGAGTTCGGGATGGACGAGGAGGTGATCACGGAGCCCGTGGATTCGTCCAGAGCTCGGGATAGCATTTCGGTCACGATTCGGTTCAGACCGTTGAGTGAAAGAGAGTACCATAGAGGAGACGAGATCGCGTGGTATGCGGACGGTGATAAGATTGTGCGCAATGAGTATAATCCAGCTACTGCTTATGCGTTTGATAGAGTGTTTGGACCGCATACGAATTCCGACGAGGTGTATGAAGTAGCTGCCAAACCTGTGGTGAAGGCTGCCATGGAAGGTGTAAATGGAACTGTGTTTGCATACGGTGTGACGAGTAGTGGTAAGACACATACTATGCATggagaccaatattctcctggtatcataccactggctatcaaagATGTTTTCAGCATTATCCAAGATACTCCAGGAAGAGAGTTCTTACTCCGTGTGTCATATCTAGAAATATACAATGAGGTGATAAATGACTTGCTTGACCCAACTGGCCAAAACTTACGTGTTAGAGAAGATGCACAGGGAACTTATGTGGAGGGTATGAAGGAAGAAGTTGTTTTGTCTCCTGGACATGCCCTTTCCTTTATTGCTGCCGGGGAAGAGCATCGTCATGTTGGATCGAACAATTTTAACCTCTTTAGCAGCCGAAGTCACACAATTTTTACACTTATGATTGAAAGCAGTGCCCATGGTGAAGATTATGATGGAGTCATCTTCTCTCAGCTTAACTTGATCGATCTTGCTGGATCTGAGAGCTCGAAAACTGAAACCACTGGATTAAGAAGAAAAGAAGGATCTTACATAAACAAAAGTCTTCTGACACTTGGAACAGTTATTGGAAAATTGAGTGAGGGGAAAGCATCTCATGTTCCATATCGCGACTCAAAGCTTACTCGCCTCCTGCAGTCTTCACTTAGTGGGCATGGCCATGTTTCTCTTATTTGCACTGTAACTCCAGCATCCAGTAATATGGAAGAAACTCATAATACCTTGAAGTTTGCTAGCAGGGCCAAGCGAGTAGAAATATATGCCTCACGTAATAAGATTATTGACGAAAAATCTCTAATTAAGAAATACCAGAGAGAAATTTCAGTCCTCAAACATGAACTTGATCATCTGAAGAAGGGGATGCAACTTGGTGTCAACCACGAGGAGATTATGACCTTAAAGCAAAAGTTGGAAGAAGGTCAAGTGAAAATGCAGTCAAGATTGGAAGAAGAGGAAGAAGCCAAGGTTGCTCTTATGAGTCGGATCCAGAAGCTAACCAAGCTCATTCTGGTTTCATCAAAGAATGCAATTCCGGGATATCTAACTGATGCTTCCAGCCACCAGCAGAGTCCTTCTGTTGGAGAGGATGATAAATATGATGCCCTACGTGATGGATCTCTTTTGGTTGAAAATGAGAGTCAAAAAGATGTTTCCACTGTGTCATATGATCCGTCTCATGATGTTAGACATATAATATCGTCAAGTAGACAGAACGAAGAACTCTCCCCAACTAGCAGTATCATCACTGAATCAACACGGCTGCTACCAGCGGGAGGGATGACAGTGTCTGATGAGATGGATCTTCTTGTTGAGCAAGTCAAAATGCTTGCTGGAGATATTGCTTTCAGTACTAGCACTTTGAAACGCTTAATGGAGCAGTCTGTAAATGATCCTGAAAGCTCCAAAATACAGATTGAGAACTTGGAACAAGATATCCAAGAAAAAAAGAAGCAAATGATGGTTTTGGAACAAAGAATAATTGAGAGTGGTGAATCTTCCGTAGCTAACTCATCACTGGTTGAAATGCAGCAGACAATCGCAAGATTAGTGACTCAGTGTGATGAAAAGGCCTTTGAGCTGGAGATAAAATCTGCAGACAACCGTGTCCTTCAAGAACAGTTAGATAATAAGTGTTCTGAAAACAGAGAATTGCAAGAAAAGGTGAAGCTGCTAGAGCAGCAACTGGCAACAGTTACTGGTGGTACTTCGTTAATGCTTACTGATCAGTGTCCGTCTGGTGAACACATTGATGAGTTGAAAAGGAAAATACAATCCCAGGAGATTGAAAATGAAAAACTGAAGCTAGAGCAAGTTCACTTGTCAGAAGAGAATAGTGGGTTGCATGTGCAGAACCAGAAACTCTCTGAAGAAGCTTCTTATGCCAAAGAACTGGCCTCTGCAGCCGCTGTGGAGTTGAAGAATTTGGCTGGGGAAGTGACCAAACTTTCATTGCAGAATGCAAAGTTGGAAAAGGAATTGATGGCTGCTCGAGACCAGGTCAACACTCGAAATGGTGTCGTGCAAACAGTTAATGGTGTTAACCGCAAGTACAGTGATGCAAGATCTGGGAGGAAGGGAAGAATTTCTAGCCGTGCTAATGAAAGTTTGGGAGTTGGTATGGATGAGTTTGAGTCATGGAGTCTTGATGCTAATGATCTGAAGATGGAACTGCAGTCTAGGAGACAGCGAGAGGCTGCCCTTGAGGCTGCATTAGCTGAAAAGGAATTTCTAGAAGAGGAATGCATTAAAAAGGTTGAAGAGGCCAAAAAAAGAGAAGCCTCGTTGGAGAATGATTTGGCAAATATGTGGGTTCTTGTGGCTAAGTTAAAGAAAGAAGGGGGTGCCGTCCCAGAATCAAACATCAATATAAAAAAAGTTGATGAGGAAGCACATACAAATGATCTGAAAACTAATGGCATTGAAAGTGATATTGTCCCCAAGGAGCAGATTTTAGATGTATCAATACCAGAAAATGAAATAGCCAATGAAGACCCTTTGGTTGTTCGACTTAAGGCACGCATGAAAGAGATGAGGGATAAAGAATTCAAGCATCTTGGCAATGGAGATGCCAATTCCCATGTTTGTAAAGTATGTTTTGAATCTTCAACTGCAGCAATTCTTCTTCCATGCCGGCATTTTTGTTTGTGTAAATCTTGCTCACTTGCTTGTTCTGAATGTCCAATATGCCGCACCAATATTTCAGATAGGCTTTTTGCTTTTACTTCTTGA 3228 0.4281 MASSSRARSSSPFSHRKPSTPLSSASSSTSSFTNGRVMPRSCSSSTSSFYNSGGGGRSMTPSRGHSESVYYGYGNPSPVEFGMDEEVITEPVDSSRARDSISVTIRFRPLSEREYHRGDEIAWYADGDKIVRNEYNPATAYAFDRVFGPHTNSDEVYEVAAKPVVKAAMEGVNGTVFAYGVTSSGKTHTMHGDQYSPGIIPLAIKDVFSIIQDTPGREFLLRVSYLEIYNEVINDLLDPTGQNLRVREDAQGTYVEGMKEEVVLSPGHALSFIAAGEEHRHVGSNNFNLFSSRSHTIFTLMIESSAHGEDYDGVIFSQLNLIDLAGSESSKTETTGLRRKEGSYINKSLLTLGTVIGKLSEGKASHVPYRDSKLTRLLQSSLSGHGHVSLICTVTPASSNMEETHNTLKFASRAKRVEIYASRNKIIDEKSLIKKYQREISVLKHELDHLKKGMQLGVNHEEIMTLKQKLEEGQVKMQSRLEEEEEAKVALMSRIQKLTKLILVSSKNAIPGYLTDASSHQQSPSVGEDDKYDALRDGSLLVENESQKDVSTVSYDPSHDVRHIISSSRQNEELSPTSSIITESTRLLPAGGMTVSDEMDLLVEQVKMLAGDIAFSTSTLKRLMEQSVNDPESSKIQIENLEQDIQEKKKQMMVLEQRIIESGESSVANSSLVEMQQTIARLVTQCDEKAFELEIKSADNRVLQEQLDNKCSENRELQEKVKLLEQQLATVTGGTSLMLTDQCPSGEHIDELKRKIQSQEIENEKLKLEQVHLSEENSGLHVQNQKLSEEASYAKELASAAAVELKNLAGEVTKLSLQNAKLEKELMAARDQVNTRNGVVQTVNGVNRKYSDARSGRKGRISSRANESLGVGMDEFESWSLDANDLKMELQSRRQREAALEAALAEKEFLEEECIKKVEEAKKREASLENDLANMWVLVAKLKKEGGAVPESNINIKKVDEEAHTNDLKTNGIESDIVPKEQILDVSIPENEIANEDPLVVRLKARMKEMRDKEFKHLGNGDANSHVCKVCFESSTAAILLPCRHFCLCKSCSLACSECPICRTNISDRLFAFTS 1075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00344 1075 ProSitePatterns Kinesin motor domain signature. 317 328 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gma12g00344 1075 SMART kinesin_4 98 425 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma12g00344 1075 PANTHER KINESIN-RELATED 1 1003 IPR027640 GO:0003777|GO:0007018
Gma12g00344 1075 Coils Coil 467 501 - -
Gma12g00344 1075 PRINTS Kinesin heavy chain signature 171 192 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma12g00344 1075 PRINTS Kinesin heavy chain signature 285 302 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma12g00344 1075 PRINTS Kinesin heavy chain signature 318 336 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma12g00344 1075 PRINTS Kinesin heavy chain signature 367 388 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma12g00344 1075 Gene3D Kinesin motor domain 91 448 IPR036961 -
Gma12g00344 1075 ProSiteProfiles Zinc finger RING-type profile. 1028 1063 IPR001841 -
Gma12g00344 1075 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1003 1073 IPR013083 -
Gma12g00344 1075 Coils Coil 433 453 - -
Gma12g00344 1075 Coils Coil 638 658 - -
Gma12g00344 1075 SUPERFAMILY RING/U-box 1027 1068 - -
Gma12g00344 1075 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 100 454 IPR027417 -
Gma12g00344 1075 MobiDBLite consensus disorder prediction 1 63 - -
Gma12g00344 1075 Coils Coil 893 931 - -
Gma12g00344 1075 ProSiteProfiles Kinesin motor domain profile. 100 417 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma12g00344 1075 CDD KISc_CENP_E 100 417 - -
Gma12g00344 1075 Pfam Kinesin motor domain 106 417 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma12g00344 1075 Coils Coil 700 734 - -
Gma12g00344 1075 Coils Coil 805 832 - -
Gma12g00344 1075 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 1 1003 - -
Gma12g00344 1075 Coils Coil 749 776 - -
Gma12g00344 1075 Pfam Zinc finger, C3HC4 type (RING finger) 1026 1068 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00344 Gma-Chr12 2838618 2850313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00344 36 1075 Miscellaneous Gene Families AT4G39050 71.063 0.0 1446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00344 K11498 - gmx:100800460 2011.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00344 12 2838618 2850313 Gma12g00344 12 2838618 2850313 ECH
Gma12g00344 12 2838618 2850313 Gma11g01031 11 8735551 8748473 GST