Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00337 ATGGATGCTATCAGAAAGCAAGCCTCCAAGCTTCGAGAACAGGTCGCTCGCCAGCAGCAGGCTGTTCTGAAGCAGTTTGGGGGTGGCGGTTATGGAGGTTCAGATAATGTGGTTACTGATGGAGTGGAGCTCCAGCTACACCAGAAACTTGAGAAACTTTATATATCGACACGTGCGGGGAAGCATTATCAAAGGGATATTGTTCGTGGTGTAGAAGGTTATATTGTTACTGGATCCAAGCAAGTGGAAATAGGAACAAAGTTGTCAGAAGATAGCAGGAAATATGGTGCAGAAAATACATGTACCAGCGGTAATACACTGTCTAGAGCTGCACTAAGTTTTGCGCGAGCCCATGCTCAAATGGAGAAAGAGCGTGGAAACTTACTAAAAGCTCTTGGTACCCAGGTAGTTGCAGAGCCATTAAGGGCAATGGTGGTGGGAGCTCCATTGGAGGATGCTCGGCATCTTGCTCAACGTTATGACAGAATGCGACAGGAAGCTGAAGCCCAGGCTATTGAAGTTTCTAAACGCCAGGCAAAAGTAAGAGAAATGCCACCCAGTGCAGAGAATACTATGAAATTAGAAGCAGCTGAAGCTAAGCTGCAAGATCTGAAGACAAACATGACCATACTGGGGAAGGAAGCAGCTGCAGCTTTGGCTGCTGTTGAAGCACAGCAACAGAGGTTAACTCTTCAGCGTATTATAGCTATGGTTGAAGCTGAGCGTGCCTATCATCAAATAGTCCTACAAATACTTGATCAGCTTGAGGGAGAAGTGACATCAGAACGACGACAAATTGAAACCCCTCCTACTCCTAGTCTGGATAACACCATGCCACCACCTCCGTCATATGAAGAAGTGAATGGTGTCTATGCTTCTCCGACACACAATGGATCAACAGATAGCATGGGTTACTTCTTGGGAGAGGTTTTATTTCCATATTCTGCTGTATCTGAAGTGGAGCTAAATCTATCAGTTGGCGATTATGTTGTTGTTCGAAAGGTGACAAACAGTGGATGGGCCGAGGGTGAATGCAAAGGCAGGGCAGGTTGGTTTCCGTTTAGTTACATTGAACGGAGGGAGCGGGTTCTTGCGAGCAAGGTGACTGAAGTTTTTTAA 1119 0.4611 MDAIRKQASKLREQVARQQQAVLKQFGGGGYGGSDNVVTDGVELQLHQKLEKLYISTRAGKHYQRDIVRGVEGYIVTGSKQVEIGTKLSEDSRKYGAENTCTSGNTLSRAALSFARAHAQMEKERGNLLKALGTQVVAEPLRAMVVGAPLEDARHLAQRYDRMRQEAEAQAIEVSKRQAKVREMPPSAENTMKLEAAEAKLQDLKTNMTILGKEAAAALAAVEAQQQRLTLQRIIAMVEAERAYHQIVLQILDQLEGEVTSERRQIETPPTPSLDNTMPPPPSYEEVNGVYASPTHNGSTDSMGYFLGEVLFPYSAVSEVELNLSVGDYVVVRKVTNSGWAEGECKGRAGWFPFSYIERRERVLASKVTEVF 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00337 372 Coils Coil 187 214 - -
Gma12g00337 372 SMART SH3_2 306 361 IPR001452 GO:0005515
Gma12g00337 372 PANTHER SH3 DOMAIN-CONTAINING 1 372 - -
Gma12g00337 372 PANTHER PROTEIN, PUTATIVE-RELATED 1 372 - -
Gma12g00337 372 Gene3D Arfaptin homology (AH) domain/BAR domain 45 268 IPR027267 -
Gma12g00337 372 Coils Coil 1 21 - -
Gma12g00337 372 Coils Coil 150 177 - -
Gma12g00337 372 Gene3D SH3 Domains 302 362 - -
Gma12g00337 372 SUPERFAMILY BAR/IMD domain-like 45 259 IPR027267 -
Gma12g00337 372 SUPERFAMILY SH3-domain 270 360 IPR036028 GO:0005515
Gma12g00337 372 Pfam Variant SH3 domain 310 358 IPR001452 GO:0005515
Gma12g00337 372 ProSiteProfiles Src homology 3 (SH3) domain profile. 303 362 IPR001452 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00337 Gma-Chr12 2790695 2793770 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00337 - - gmx:100791309 704.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00337 12 2790695 2793770 Gma12g00337 12 2790695 2793770 ECH
Gma12g00337 12 2790695 2793770 Gma11g01022 11 8660961 8664454 GST