Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00328 ATGGCTGAATCTCTGAAAGATTACGAGGAGGATTTTGAAAATCCTGAAAAGAAGCCCAGAAGGAACAAGTACGCTTTCGCATGTGCTATTTTGGCTTCAATGACTTCCATCCTACTAGGTTACGATATTGGAGTGATGAGTGGAGCAGCACTGTACATACAAAGAGATCTCAAGGTATCGGACGTGCAAATCGAAATCCTGAACGGTATCATAAACCTCTACTCTCCCGTCGGTTCTTTCATCGCCGGCAGAACCTCCGACTGGATAGGTCGCCGTTACACCATCGTCCTCGCCGGCGCCATCTTCTTCGTCGGAGCCATCCTCATGGGATTCTCCCCCAACTATGCCTTTCTTATGTTTGGCCGCTTCTTCGCCGGCGTCGGCATCGGCTTCGCCTTCCTCATCGCCCCCGTCTACACCTCCGAAATCTCCCCCAGCTCCTCTCGCGGCTTCCTCACTTCCTTGCCTGAGGTATTTCTGAACGGAGGGATTTTAATAGGATACATTTCAAACTACGGATTTTCGAAGCTGGCACTGCGGTTGGGTTGGCGGCTGATGCTGGGAGTGGGAGCCATTCCTTCAATTTTGATAGGCGTGGCAGTGTTAGCCATGCCGGAGTCGCCAAGGTGGCTGGTGGCAAAAGGTCGATTAGGCGAAGCCAAAAGAGTTCTCTACAAAATCTCCGAGTCGGAGGAAGAGGCTCGGCTCAGACTAGCCGATATCAAAGACACGGCTGGGATCCCTCAAGACTGCGACGACGACGTCGTTTTGGTGTCGAAGCAAACCCACGGCCACGGCGTCTGGAGAGAGCTTTTCCTTCACCCCACTCCCGCGGTTCGCCACATCTTCATCGCGTCGCTTGGGATTCACTTCTTCGCGCAAGCCACGGGCATAGACGCCGTCGTTTTGTACAGCCCAAGAATCTTCGAGAAGGCCGGGATCAAATCCGATAACTACCGTCTCCTCGCCACGGTTGCGGTTGGGTTCGTCAAGACCGTTTCCATTTTGGTCGCCACTTTTTTCTTGGACCGGGCCGGGCGGCGCGTGTTGCTGCTTTGCAGCGTTAGTGGGCTCATACTCTCGCTTTTGACTCTGGGCCTGAGTCTCACTGTGGTGGACCATTCGCAGACCACGCTGAATTGGGCCGTTGGGCTCAGCATCGCTGCGGTGTTGTCCTACGTGGCAACTTTCTCTATCGGGTCTGGGCCCATCACGTGGGTTTATAGCTCCGAGATATTCCCGTTGAGGCTGCGGGCTCAGGGCGTGGCAATTGGGGCAGCGGTTAATAGGGTCACCAGTGGGGTCATTGCGATGACTTTTTTGTCCCTCCAGAAAGCTATTACCATTGGGGGTGCTTTCTTTCTTTTCGCTGGTGTCGCTGCTGTTGCGTGGATTTTTCACTACACGCTGCTCCCTGAAACACGTGGGAAGACTCTCGAGGAAATTGAAAAGTCTTTCGGTAATTTCTGCAGGAAACCCAAAGCGGAAGAAGGACTTGACGATAACGTTGAAATCCAATTAAAGACCCGTGACCAAACTTTGACAAGCGTCGATTAG 1557 0.5305 MAESLKDYEEDFENPEKKPRRNKYAFACAILASMTSILLGYDIGVMSGAALYIQRDLKVSDVQIEILNGIINLYSPVGSFIAGRTSDWIGRRYTIVLAGAIFFVGAILMGFSPNYAFLMFGRFFAGVGIGFAFLIAPVYTSEISPSSSRGFLTSLPEVFLNGGILIGYISNYGFSKLALRLGWRLMLGVGAIPSILIGVAVLAMPESPRWLVAKGRLGEAKRVLYKISESEEEARLRLADIKDTAGIPQDCDDDVVLVSKQTHGHGVWRELFLHPTPAVRHIFIASLGIHFFAQATGIDAVVLYSPRIFEKAGIKSDNYRLLATVAVGFVKTVSILVATFFLDRAGRRVLLLCSVSGLILSLLTLGLSLTVVDHSQTTLNWAVGLSIAAVLSYVATFSIGSGPITWVYSSEIFPLRLRAQGVAIGAAVNRVTSGVIAMTFLSLQKAITIGGAFFLFAGVAAVAWIFHYTLLPETRGKTLEEIEKSFGNFCRKPKAEEGLDDNVEIQLKTRDQTLTSVD 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00328 518 Pfam Sugar (and other) transporter 28 486 IPR005828 GO:0016021|GO:0022857|GO:0055085
Gma12g00328 518 ProSiteProfiles Major facilitator superfamily (MFS) profile. 28 475 IPR020846 GO:0022857
Gma12g00328 518 PANTHER POLYOL/MONOSACCHARIDE TRANSPORTER 1 12 509 - -
Gma12g00328 518 ProSitePatterns Sugar transport proteins signature 1. 82 99 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gma12g00328 518 TIGRFAM SP: MFS transporter, sugar porter (SP) family 6 482 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma12g00328 518 ProSitePatterns Sugar transport proteins signature 2. 124 149 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gma12g00328 518 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 12 509 IPR045262 GO:0015144
Gma12g00328 518 SUPERFAMILY MFS general substrate transporter 11 484 IPR036259 -
Gma12g00328 518 Gene3D MFS general substrate transporter like domains 18 488 IPR036259 -
Gma12g00328 518 PRINTS Sugar transporter signature 36 46 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma12g00328 518 PRINTS Sugar transporter signature 119 138 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma12g00328 518 PRINTS Sugar transporter signature 293 303 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma12g00328 518 PRINTS Sugar transporter signature 387 408 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma12g00328 518 PRINTS Sugar transporter signature 410 422 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00328 Gma-Chr12 2718949 2721517 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00328 15 512 Organic Solute Cotransporters AT3G18830 66.337 0.0 696
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00328 - - gmx:100816478 983.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00328 12 2718949 2721517 Gma12g00328 12 2718949 2721517 ECH