Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00319 ATGTCGGCGTCGACGGGAAGCAGCAAAATCCGGCGCATAGTTCGGGTGAGGCAAATGCTTCTCCGGTGGCGGAGGAAGGCAGCGGCGGACGTTCCGGCTGGACACGTGGCGGTGTGCGTGGGGCCCAACAGGAGGAGGTTCATCGTTCGCGCCACGCATCTGAACCACCCGATTTTCAAGATGCTTCTTGTGAAGGCCGAAGAGGAATACGGTTTCTGCAACCACGGTCCTCTCGCTATACCCTGCGACGAGTCACTCTTCGAAGAGCTTCTTCGGGTCGTGTCCCGACCCGTACCCGTACCCGGATTCTCCACGCTCGAGGATTTCCAGAGACGCTGCCACATGGATGTTTCCACTGGCTTTGACGTCGTAGGAGAATCGTGGCCGTTGCTTCGTGACGAGCCAATTTGCTGA 414 0.587 MSASTGSSKIRRIVRVRQMLLRWRRKAAADVPAGHVAVCVGPNRRRFIVRATHLNHPIFKMLLVKAEEEYGFCNHGPLAIPCDESLFEELLRVVSRPVPVPGFSTLEDFQRRCHMDVSTGFDVVGESWPLLRDEPIC 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00319 137 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 5 133 IPR003676 GO:0009733
Gma12g00319 137 Pfam Auxin responsive protein 15 93 IPR003676 GO:0009733
Gma12g00319 137 PANTHER SMALL AUXIN-UP RNA-RELATED 5 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00319 Gma-Chr12 2663585 2664376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00319 7 131 Calmodulin-binding Proteins AT4G34750 51.064 5.32e-41 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00319 K14488 - gmx:100795345 278.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00319 12 2663585 2664376 Gma12g00319 12 2663585 2664376 ECH