Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00307 ATGTCAATTCTCAAAGTTCTTTTGATTACCATCATTGTTTCATTGGTCATTTCTGCCAGCAGCGCCCATGATGAAGACAACAAGAAGATGACTTCTGAAAGCGATGACAACGACAAAGACAAGAAAAAGACTGTGACTTATGATGGCAGGTCTCTCATTATCAATGGAAGACGAGAGCTTCTCTTCTCCGGTTCCATTCATTACCCACGAAGCACCCCCGAGATGTGGGCAGACATTCTTGAAAAAGCAAAACATGGAGGCATAAAGGTGGTCCAAACTTACATATTCTGGAACATTCATGAGCCTGAGAAAGGCAAGTTCTCAATTGAGCCGCAGTATGATTACATAAAGTTCATGAAGCTCGTTCAAAAGAAAGGAATGTATGTAACCCTCAGGGTTGGGCCTTTCATCCAAGCTGAATGGAACCACGGAGGACTTCCATATTGGCTGAGAGAGATCCCTGATATCATATTCCGCTCTAACAATGAACCCTTTAAGAAGCACATGAAAGAATATGTATCAACTGTTGTAAAAACGTTGAAAGAGGCGAAGCTCTTTGGTCCCCAAGGAGGCCCCATCATCTTGGCACAGATTGAGAATGAGTACAACCATATCCAACGTGCTTTCAGAGAGGAAGGAGATAATTATGTCCAATGGGCTGCGAAAATGGCAGTGTCGCTGGATGTTGGAGTTCCATGGATCATGTGCAAGCAGAGAGATGCTCCTGATCCAGTGATTAATGCTTGCAATGGAAGGCACTGTGGTGATACCTTTGCAGGCCCCAACAAACCTTACAAGCCTTCTCTATGGACTGAAAACTGGACGGTTCAGTATAGAGTGTTTGGAGATCCACCATCCCGAAGATCAGCAGAAGACATTGCCTTTTCAGTTGCTCGCTTCTTCTCTAAGAATGGATCTTTGGTGAACTATTATATGTACCATGGTGGAACAAATTTTGGTAGAACAAGCTCTGCCTTCACTACAACCCAATATTATGATGAAGCCCCTCTTGATGAGTACGGTATGCAGAGAGAACCAAAATGGAGTCACTTGAGGGATGTGCACAAGGCATTGAGCCTATGCAAGAAGGCCTTGTTCAATGGTGAGTCTACCGTCACAAAACTGAGCCAACATCACGAGACTATAGTTTTCGAGAAGCCAGGAAGTGATTTGTGCGCTGCTTTCCTCACCAACAACCACACCTTGACACCAGCAACCATAAAATTCAGAGGTACTGACTACTATATGCCACCACGTTCCATTAGCATACTCCCTGACTGCAAGACTGTTGTCTTCAACACTCAATTTATTGCTTCACAACATAATTCAAGGAACTTCAAGAGGTCAATGGCAGCAAACAATCATAAGTGGGAGGTGTATTCTGAGAACATTCCTACCACCAAGCAAATTCCAACCAATGAAAAGATTCCTACAGAGCTTTACAGTTTGCTTAAAGACACCAGCGACTATGCATGGTACACCACCAGCGTGGAACTGGGTCCAGAAGACTTGCCAAAGAAGAATGATATATCCCCCGTTCTCCGTATTATGAGTCTTGGCCATTCATTGGTTGCCTTTGTAAATGGAGAATTCATTGGATCAAATCACGGTTCCCATGAAGAGAAAAGTTTTGAATTCCAGAAACCTGTAACCTTGAAGGTTGGAGTTAACCAAATAGCTATCTTGGCTTGCACTGTGGGACTCCCCGACAGTGGAGCATACATGGAGCACAGGTTCGCTGGACCAAAGTCTATTTTCATCCTTGGTCTCAACTCTGGAAAAATTGATCTCGCTTCTAATGGTTGGGGTCATAAGGTTGGTATCAAAGGTGAGGAGCTTGGCATTTTCACTGAAGAGGGGTCAAAGAAAGTACAATGGAAAGAAGCCAAGGGATCTGGACCAGCTCTCTCCTGGTACAAGACAAATTTTGAAACCCCGGAGGGAACGGATCCTGTTGCCATCAGAATGACTGGTATGGGGAAGGGAATGATTTGGATCAATGGCAAAAGCATTGGTCGTCACTGGATGAGTTACCTCTCTCCTCTTGGAATGCCTACTCAGTCAGAGTACCACATCCCCAGAGCTTTCTTCAATCCAAAAGACAACTTGATTGTTGTGTTTGAGGAAGAGATAGCAAATCCAGAAAAGGTTGAGATCCTAACTGTAGACAGAGATACAATATGCAGTTTCATCACAGAGAATCACCCCCCCAATGTGAAGTCATGGGCAGTTAAGAGCGAGAAGTTCCAGGCTCTTTCGAATAATCTGGTGCCAACAGCTACACTCAAATGTCCAAACCGCAGAACCATTAAGGCTGTGGAGTTTGCAAGCTTTGGTGATCCTGCTGGTGTATGTGGAGCCTATACTTTAGGCAAATGTAATGCACCTTCCACCAAGCAGATTGTTGAGAAGCATTGCCTTGGAAAACAATCCTGTAATGTTCCAATTGACAAGGACGCCTTCACTAAGGGCCAAGATGCTTGCCGAAATATGGTGAAGGCACTTGCAATCCAAGTGAAGTGTGAAGCCTAG 2532 0.4435 MSILKVLLITIIVSLVISASSAHDEDNKKMTSESDDNDKDKKKTVTYDGRSLIINGRRELLFSGSIHYPRSTPEMWADILEKAKHGGIKVVQTYIFWNIHEPEKGKFSIEPQYDYIKFMKLVQKKGMYVTLRVGPFIQAEWNHGGLPYWLREIPDIIFRSNNEPFKKHMKEYVSTVVKTLKEAKLFGPQGGPIILAQIENEYNHIQRAFREEGDNYVQWAAKMAVSLDVGVPWIMCKQRDAPDPVINACNGRHCGDTFAGPNKPYKPSLWTENWTVQYRVFGDPPSRRSAEDIAFSVARFFSKNGSLVNYYMYHGGTNFGRTSSAFTTTQYYDEAPLDEYGMQREPKWSHLRDVHKALSLCKKALFNGESTVTKLSQHHETIVFEKPGSDLCAAFLTNNHTLTPATIKFRGTDYYMPPRSISILPDCKTVVFNTQFIASQHNSRNFKRSMAANNHKWEVYSENIPTTKQIPTNEKIPTELYSLLKDTSDYAWYTTSVELGPEDLPKKNDISPVLRIMSLGHSLVAFVNGEFIGSNHGSHEEKSFEFQKPVTLKVGVNQIAILACTVGLPDSGAYMEHRFAGPKSIFILGLNSGKIDLASNGWGHKVGIKGEELGIFTEEGSKKVQWKEAKGSGPALSWYKTNFETPEGTDPVAIRMTGMGKGMIWINGKSIGRHWMSYLSPLGMPTQSEYHIPRAFFNPKDNLIVVFEEEIANPEKVEILTVDRDTICSFITENHPPNVKSWAVKSEKFQALSNNLVPTATLKCPNRRTIKAVEFASFGDPAGVCGAYTLGKCNAPSTKQIVEKHCLGKQSCNVPIDKDAFTKGQDACRNMVKALAIQVKCEA 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00307 843 PRINTS Glycosyl hydrolase family 35 signature 55 72 IPR001944 GO:0004553|GO:0005975
Gma12g00307 843 PRINTS Glycosyl hydrolase family 35 signature 76 94 IPR001944 GO:0004553|GO:0005975
Gma12g00307 843 PRINTS Glycosyl hydrolase family 35 signature 131 150 IPR001944 GO:0004553|GO:0005975
Gma12g00307 843 PRINTS Glycosyl hydrolase family 35 signature 188 203 IPR001944 GO:0004553|GO:0005975
Gma12g00307 843 PRINTS Glycosyl hydrolase family 35 signature 269 284 IPR001944 GO:0004553|GO:0005975
Gma12g00307 843 PRINTS Glycosyl hydrolase family 35 signature 306 321 IPR001944 GO:0004553|GO:0005975
Gma12g00307 843 PRINTS Glycosyl hydrolase family 35 signature 325 341 IPR001944 GO:0004553|GO:0005975
Gma12g00307 843 PRINTS Glycosyl hydrolase family 35 signature 634 648 IPR001944 GO:0004553|GO:0005975
Gma12g00307 843 PRINTS Glycosyl hydrolase family 35 signature 661 677 IPR001944 GO:0004553|GO:0005975
Gma12g00307 843 SUPERFAMILY Galactose-binding domain-like 421 581 IPR008979 -
Gma12g00307 843 ProSiteProfiles SUEL-type lectin domain profile. 758 842 IPR000922 GO:0030246
Gma12g00307 843 Gene3D - 606 732 - -
Gma12g00307 843 PANTHER GLYCOSIDE HYDROLASE FAMILY 35 PROTEIN 34 838 - -
Gma12g00307 843 Pfam Beta-sandwich domain in beta galactosidase 365 435 IPR041392 -
Gma12g00307 843 PANTHER BETA-GALACTOSIDASE RELATED 34 838 IPR001944 GO:0004553|GO:0005975
Gma12g00307 843 Pfam Glycosyl hydrolases family 35 51 357 IPR031330 -
Gma12g00307 843 SUPERFAMILY (Trans)glycosidases 43 362 IPR017853 -
Gma12g00307 843 Gene3D - 411 579 - -
Gma12g00307 843 SUPERFAMILY Galactose-binding domain-like 600 745 IPR008979 -
Gma12g00307 843 Pfam Galactose binding lectin domain 762 841 IPR000922 GO:0030246
Gma12g00307 843 Gene3D - 750 843 IPR043159 -
Gma12g00307 843 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 190 202 IPR019801 GO:0004553|GO:0005975
Gma12g00307 843 Gene3D Glycosidases 41 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00307 Gma-Chr12 2488225 2493456 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00307 45 841 Glycoside Hydrolase AT2G16730 60.424 0.0 1065
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00307 - - gmx:102663614 1681.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00307 12 2488225 2493456 Gma12g00307 12 2488225 2493456 ECH
Gma12g00307 12 2488225 2493456 Gma11g00980 11 8333882 8340153 GST