Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00302 ATGTTGCCAAGAAGTAGAACCCTTCCTAGCAGAATCCACCAAGGAATTATAGAAGAGAGGCACGATGTCAGGCCCTACGTACAAGTAGAAGTGCGACCCAATAATATCCAAACGGAGACCCAAGCGATGAATATCCAGTCTAACTATTCCAAGTGCTTCGATGATGATGGTCGCTTGAAGAGAACAGGAACATTTTGGACGGCAACTGCTCATATCATCACTGCTGTGATAGGGTCGGGAGTCCTTTCACTAGCATGGGCGGTTGCTCAGCTTGGTTGGGTTGCTGGACCTGTTGTCATGTTTCTCTTTGCCGTCGTCAATCTCTACACTTCCAACCTATTAACACAGTGTTACAGGACCGGTGACTCCGTTAATGGACACAGAAATTACACCTACATGGAGGCTGTCAAGTCCATCTTGGGAGGAAAAAAGGTCAAGTTATGTGGCCTCATCCAATATATCAATCTGTTTGGAGTTGCAATCGGGTACACCATTGCTGCCTCTGTCAGTATGATGGCCATAAAAAGGTCGAATTGCTATCACAGCAGTCATGGAAAAGATCCCTGCCACATGTCAAGCAATGGGTATATGATAACATTTGGAATAGCAGAAGTGATATTTTCCCAAATCCCAGACTTTGATCAGGTGTGGTGGCTATCCATAGTTGCAGCTATCATGTCCTTCACTTATTCTTCAGTTGGATTGAGTCTTGGAGTGGCCAAAGTAGCAGAAAATAAAACTTTCAAAGGAAGCCTGATGGGAATTAGCATTGGCACAGTAACACAAGCCGGAACAGTCACCAGCACACAGAAAATATGGAGGAGTTTACAAGCTCTTGGGGCAATGGCCTTTGCATACTCCTTTTCCATTATCCTCATCGAAATTCAGGACACCATAAAATCTCCTCCTGCAGAGCACAAGACCATGAGAAAGGCCACAACATTGAGCATCGCGGTTACCACAGTGTTCTATTTACTCTGTGGATGCATGGGTTATGCAGCCTTCGGAGATAATGCACCTGGAAATCTCTTGACTGGTTTTGGGTTCTATAACCCTTATTGGCTTCTGGACATTGCCAACCTTGCAATTGTTATCCACCTAGTTGGGGCATATCAGGTTTTTTCCCAGCCCTTATTTGCATTTGTGGAAAAATGGAGTGTACGCAAATGGCCAAAGAGCAATTTTGTCACGGCAGAATATGATATACCGATTCCCTGCTTTGGTGTGTACCAACTCAACTTCTTCCGCTTAGTATGGAGAACCATTTTTGTGCTGTTGACGACCCTCATAGCCATGCTCATGCCTTTTTTCAACGATGTGGTTGGAATACTTGGCGCTTTTGGGTTCTGGCCCTTAACAGTTTATTTCCCTATCGACATGTATATTTCGCAAAAGAAGATTGGACGATGGACTAGTCGGTGGATTGGACTTCAATTACTTAGTGTCAGTTGCCTCATCATTTCATTGTTAGCTGCAGTTGGTTCCATGGCAGGGGTTGTTTTGGACCTCAAGACTTATAAGCCATTTAAAACTAGTTATTAA 1542 0.4416 MLPRSRTLPSRIHQGIIEERHDVRPYVQVEVRPNNIQTETQAMNIQSNYSKCFDDDGRLKRTGTFWTATAHIITAVIGSGVLSLAWAVAQLGWVAGPVVMFLFAVVNLYTSNLLTQCYRTGDSVNGHRNYTYMEAVKSILGGKKVKLCGLIQYINLFGVAIGYTIAASVSMMAIKRSNCYHSSHGKDPCHMSSNGYMITFGIAEVIFSQIPDFDQVWWLSIVAAIMSFTYSSVGLSLGVAKVAENKTFKGSLMGISIGTVTQAGTVTSTQKIWRSLQALGAMAFAYSFSIILIEIQDTIKSPPAEHKTMRKATTLSIAVTTVFYLLCGCMGYAAFGDNAPGNLLTGFGFYNPYWLLDIANLAIVIHLVGAYQVFSQPLFAFVEKWSVRKWPKSNFVTAEYDIPIPCFGVYQLNFFRLVWRTIFVLLTTLIAMLMPFFNDVVGILGAFGFWPLTVYFPIDMYISQKKIGRWTSRWIGLQLLSVSCLIISLLAAVGSMAGVVLDLKTYKPFKTSY 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00302 513 PANTHER OS02G0102200 PROTEIN 19 507 - -
Gma12g00302 513 Pfam Transmembrane amino acid transporter protein 61 500 IPR013057 -
Gma12g00302 513 PANTHER OS05G0424000 PROTEIN-RELATED 19 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00302 Gma-Chr12 2417993 2421906 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00302 51 513 Organic Solute Cotransporters AT5G09220 72.198 0.0 733
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00302 K24917 - gmx:100776384 1026.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00302 12 2417993 2421906 Gma12g00302 12 2417993 2421906 ECH