Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00293 ATGGCATCGGATAAGGTGGTGGAAACGGTCATAGCAGGGAACTACGTGGAAATGGAAACTGAAGGGAAGCCCAAGGACGTAAAAACCAGGCTATCAAGCTTGTTGTGGCATGGTGGTTCTGTTTATGATGCTTGGTTTAGCTGTGCTTCCAACCAGGTGGCCCAAGTGCTGCTTACGTTGCCATATTCATTTTCCCAGCTGGGAATGCTTTCTGGCATACTTTTCCAACTCTTCTATGGTTTACTGGGAAGTTGGACAGCTTACCTCATTAGCATACTCTACGTCGAATACAGAACAAGAAAAGAGAGAGAGAAGGTTAACTTCAGAAACCATGTCATCCAGTGGTTTGAGGTTCTTGATGGACTCCTCGGGAAGCACTGGAGAAACGTGGGTTTGGCCTTTAACTGCACATTTCTTCTGTTTGGATCTGTTATACAACTGATAGCTTGTGCAAGCAACATATATTACATAAATGACAACCTGGACAAGAGGACTTGGACTTACATCTTTGGAGCTTGCTGTGCCACCACTGTCTTTATTCCTTCCTTTCACAACTACAGAATCTGGTCCTTTTTGGGCCTCCTCATGACCACTTACACTGCCTGGTATCTCACAGTTGCCTCTCTCCTTCACGGTCAGATGGAAGGAGTTAAGCATTCGGGTCCGACCAAATTGGTTCTATATTTTACGGGGGCCACAAACATTCTCTACACATTCGGGGGACATGCTGTTACTGTGGAGATAATGCACGCGATGTGGAAGCCTCAAAAGTTCAAGGCCTTATACTTACTGGCAACCCTGTATGTGCTGACACTGACGCTTCCATCGGCAGCAGCAGTGTATTGGGCCTTTGGAGACATGCTTCTAAATCACTCCAATGCTTTTGCTCTCCTTCCTAAATCACCCTTCCGTGACATGGCTTTTATAACATTCGGGTTTGCATGCACCCCATTATATTTCGTGTGGGAGAAAGCAATAGGGATGCACGAGTGCAAGAGCCTATGCAAGCGTGCATTGGTGAGATTGCCCGTGGTGATCCCTATATGGTTCTTGGCCATCATATTCCCCTTCTTTGGTCCCATCAACTCCACCGTTGGCTCTCTCCTTGTCAGCTTCACCGTTTACATTATCCCCGCCCTCGCCCACATCTTCACCTTCAAATCACCCTCTGCCAGACAGAATGCAGTGGAACAACCTCCCAAGTTTGTTGGAAGATGGGTGGGAACCTTTATTATCAACACATTTGTGGTGGTGTGGGTCCTAGTCGTAGGGTTTGGATTTGGCGGGTGGGCCAGCATGGTGAACTTCATACGCCAGATTGACACATTTGGACTCTTCACAAAGTGTTACCAATGCCCTCCACCGATTCTACCGCCTGTGCCGCCACATCAGCTCAACGCCACCGCGCCTTCGCCGCTTCACCACCCTCATCATGGCCACTAA 1443 0.4809 MASDKVVETVIAGNYVEMETEGKPKDVKTRLSSLLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILFQLFYGLLGSWTAYLISILYVEYRTRKEREKVNFRNHVIQWFEVLDGLLGKHWRNVGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWYLTVASLLHGQMEGVKHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKALYLLATLYVLTLTLPSAAAVYWAFGDMLLNHSNAFALLPKSPFRDMAFITFGFACTPLYFVWEKAIGMHECKSLCKRALVRLPVVIPIWFLAIIFPFFGPINSTVGSLLVSFTVYIIPALAHIFTFKSPSARQNAVEQPPKFVGRWVGTFIINTFVVVWVLVVGFGFGGWASMVNFIRQIDTFGLFTKCYQCPPPILPPVPPHQLNATAPSPLHHPHHGH 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00293 480 Pfam Transmembrane amino acid transporter protein 37 421 IPR013057 -
Gma12g00293 480 PANTHER OS05G0424000 PROTEIN-RELATED 3 460 - -
Gma12g00293 480 PANTHER AUXIN TRANSPORTER-LIKE PROTEIN 2 3 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00293 Gma-Chr12 2332514 2336730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00293 4 452 Organic Solute Cotransporters AT2G21050 87.090 0.0 841
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00293 K13946 - gmx:100812002 961.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00293 12 2332514 2336730 Gma12g00293 12 2332514 2336730 ECH
Gma12g00293 12 2332514 2336730 Gma11g00965 11 8186687 8191680 GST