LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma12g00266	ATGGCTTCTGCGCCATCGAGAACCCTAACGGACTTTTTCCAACCCGCTTCGAAGCGCTTGAAGCCCACTCTCCCCGCATCATGCAAATCCGACGACGCCAATGCTTCCACGCTCTCCGTCGATCAGAAGTTGCGCATGGAATACAACAAGCTCCTCGCCAAGTCCAAGAGGAATCTCAAACTCTGCGTCGAGAGGGTCTCCAAAAGCAAAGAATCAGGTTTAGGTGGCGTGAAGCTGGAAGAGCTGCTGGTGGAAGAAACGTGGTTGGAAGCTCTACCTGGTGAACTCCAAAAACCCTATGCCCTCACTCTCTCCAAATTCGTTGAAAGTGAGATTTCGGGCGGAGACGGCGTCATTTTCCCTCCGACGCACTTGATTTTCAACGCTCTTAACTCCACGCCTTTTCATACAGTGAAAGCTGTTATCCTTGGCCAGGACCCTTATCATGGTCCTGGTCAAGCAATGGGGCTTTCATTCTCGGTTCCCGAGGGAATCAAAGTCCCTTCCAGTTTGGTAAATATATTTAAGGAACTTCACCAAGACCTTGGCTGCTCCATTCCAACTCATGGAAATCTTCAAAAATGGGCTGTGCAGGGTGTTCTCTTGCTGAATGCTGTTCTCACAGTCAGGAAGCATCAAGCAAATTCTCATGCCAAAAAAGGCTGGGAACAATTTACTGATGTTGTTATCAAGACCATCTCACAGAAGAAGGAAGGAGTTGTGTTTCtgttgtggggaaactctgctcgggaaaaatctaGGTTAATTGATGCAAGAAAGCATCATGTTCTTACTGCTGCACATCCTTCTGGTTTGTCTGCAAATAGAGGCTTCTTTGGCTGCAGGCACTTCTCTCGCACTAACCAACTTCTGGAGCAAATGGGGATTGATCCAATAGATTGGCAACTATAA	912	0.4605	MASAPSRTLTDFFQPASKRLKPTLPASCKSDDANASTLSVDQKLRMEYNKLLAKSKRNLKLCVERVSKSKESGLGGVKLEELLVEETWLEALPGELQKPYALTLSKFVESEISGGDGVIFPPTHLIFNALNSTPFHTVKAVILGQDPYHGPGQAMGLSFSVPEGIKVPSSLVNIFKELHQDLGCSIPTHGNLQKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQFTDVVIKTISQKKEGVVFLLWGNSAREKSRLIDARKHHVLTAAHPSGLSANRGFFGCRHFSRTNQLLEQMGIDPIDWQL	303

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma12g00266	303	Gene3D	-	66	303	IPR036895	-
	Gma12g00266	303	PANTHER	URACIL-DNA GLYCOSYLASE	8	303	IPR002043	GO:0004844\|GO:0006281\|GO:0006284
	Gma12g00266	303	SMART	UDG_2_a	131	291	-	-
	Gma12g00266	303	Hamap	Uracil-DNA glycosylase [ung].	85	302	IPR002043	GO:0004844\|GO:0006281\|GO:0006284
	Gma12g00266	303	ProSitePatterns	Uracil-DNA glycosylase signature.	139	148	IPR018085	GO:0006281\|GO:0016799
	Gma12g00266	303	SUPERFAMILY	Uracil-DNA glycosylase-like	83	303	IPR036895	-
	Gma12g00266	303	Pfam	Uracil DNA glycosylase superfamily	136	290	IPR005122	-
	Gma12g00266	303	SMART	UDG_2	131	291	IPR005122	-
	Gma12g00266	303	CDD	UDG-F1-like	100	301	IPR002043	GO:0004844\|GO:0006281\|GO:0006284
	Gma12g00266	303	TIGRFAM	ung: uracil-DNA glycosylase	86	295	IPR002043	GO:0004844\|GO:0006281\|GO:0006284

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma12g00266	Gma-Chr12	2148235	2152444	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma12g00266	K03648		-	gmx:100818241	582.793

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma12g00266	12	2148235	2152444	Gma11g00946	11	7994820	7999386	GST