Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00264 ATGATTCTCCAACACGCTTCTCCCACCTCTCCACCCCTCTGCCCCTGTAACTTGTTCGCCAATTCCGCCTCCCTCAAATTCCGCAGAAAATGCACTGTCCTACTCTGCGCCGTTCCCTCCGACAACCCAAATTGGAACGCCGATTTCGCCAATTCCGCCCGCAGGACCGCCACAACCTTCGTCCTCAAACGAATTTCCAACCAACTCGAACCCCAcaccaccaccaccaccaccaccaccaACGATAACGGTGTTATTGATTCCGAATTACAAGCAACACCGCCGGTTCAATTAGGTTCAAACTTCACCGCTTTCAGCGAGGATCCTATTGTGGATAAGCTGAGGACCCAGCTAGGGGTGATACACCCGATTCCCTCCCCTCCAATTAACCGCAACGTCGTCTTCCTGTTCGTCTTCTTCTTCTTCGTCGGCGTCGTGTTCGACAAATTGTGGACTTCGCGGCGGCGGAACAAAAATAACAGTGAAGATAGGTTGCGTGGCGGCGTGTGGCCGCAGGTGCCGACGAGCTTCTCGCTGTTTCTTGAGAAGGATTTACAGAGGAAGGAGTCGGTGGAGTGGGTGAACATGGTGCTGGGGAAGCTGTGGAAGGTCTATAGAGGCGGAATTGAGAACTGGATCATAGGGCTGCTTCAGCCTGTCATTGATAACCTCAAGAAGCCTGATTACGTGCAGAGGGTTGAGATTAAGCAGTTCTCTTTGGGGGATGAACCTTTGTCTGTTAGGAACGTTGAGCGCAGGACTTCTCGCAGAGTTAATGATTTGCAGTACCAGATAGGCCTTAGGTATACAGGTGGTGCTCGCATGCTGTTAATGCTTTCTCTGAAATTTGGCATCATTCCCATTGTTGTTCCTGTTGGTGTTCGAGATTTTGACATTGATGGTGAACTTTGGGTAAAATTAAGATTAATACCAACGGAACCTTGGGTGGGAGCTGCTTCATGGGCTTTTGTTTCCCTCCCAAAGATCAAGTTTGAGCTGTCTCCATTCCGTCTGTTCAATTTAATGGCAATTCCAGTTCTCTCGATGTTTTTGACTAAACTTCTAACTGAAGATTTACCTAAACTATTTGTACGCCCAAAGAAAATAGTTTTAGATTTCCAAAAGGGAAAAGCTGTTGGTCCAGTTGCTGGTGGTGTTAAATCTGGAGAAATGCAAGAAGGAAACAAGGATTCTGTTGGTGAACTATCTGTTACTCTGGTGGATGCTCGAAAGCTTTCTTATATTTTTTATGGCAAGACGGATCCTTATGTTATTCTTAGCCTTGGAAATCAAGTTATACGCAGCAAAAAGAACAGTCAAACTACTGTAATTGGACCCCCTGGAATGCCAATTTGGAATCAGGATTTTCACATGCTTGTTTCCAACCCTAGAAAGCAGAAGTTATTCATCCAAGTAAAGGATGCTCTAGGATTTGCAGATTTGACTATTGGTACAGGAGAGGTTGATTTAGGATCTCTTAAAGACACTGTTCCAACAGACAGAATTGTGGTTTTACAAGGAGGTTGGGGATTCTTAGGAAAGCGCTCTTCTGGGGAGATATTACTTCGGCTAACATATAAAGCATACGTGGAGGATGAGGAAGATGATAAAACTGAGGTGGATGCCATTTATACTGACATTTCTGATGACGAGTTGTCTGATTCAGAAGCAAATGGTACTAATGGGAAGGATGAAAGAGATTCTGTGTACGAAACAGATAAGGAGTCGTTTATGGATGTTTTGGCAGCATTAATTGTTAGCGAAGAATTTCAGGGGATAGTAGCATCTGAAACAGGGTTTAGCAAAGTTTTGGATAATGGCTCAAATGTTGGATCTAGAGTGTCAAATTCTCAAGTTCCCAATGTTGAACCAATTCCCTCTAGTTCTGATAATTCCGAAGGCTCTGGAGGGTCAGCTTTACTTTGGCTTGCTGTGATTACTAGCATATCACTACTAATTGCTCTCAATGTTGGGGGATCCAGTCTCTTCAATCCGTAA 1998 0.4414 MILQHASPTSPPLCPCNLFANSASLKFRRKCTVLLCAVPSDNPNWNADFANSARRTATTFVLKRISNQLEPHTTTTTTTTNDNGVIDSELQATPPVQLGSNFTAFSEDPIVDKLRTQLGVIHPIPSPPINRNVVFLFVFFFFVGVVFDKLWTSRRRNKNNSEDRLRGGVWPQVPTSFSLFLEKDLQRKESVEWVNMVLGKLWKVYRGGIENWIIGLLQPVIDNLKKPDYVQRVEIKQFSLGDEPLSVRNVERRTSRRVNDLQYQIGLRYTGGARMLLMLSLKFGIIPIVVPVGVRDFDIDGELWVKLRLIPTEPWVGAASWAFVSLPKIKFELSPFRLFNLMAIPVLSMFLTKLLTEDLPKLFVRPKKIVLDFQKGKAVGPVAGGVKSGEMQEGNKDSVGELSVTLVDARKLSYIFYGKTDPYVILSLGNQVIRSKKNSQTTVIGPPGMPIWNQDFHMLVSNPRKQKLFIQVKDALGFADLTIGTGEVDLGSLKDTVPTDRIVVLQGGWGFLGKRSSGEILLRLTYKAYVEDEEDDKTEVDAIYTDISDDELSDSEANGTNGKDERDSVYETDKESFMDVLAALIVSEEFQGIVASETGFSKVLDNGSNVGSRVSNSQVPNVEPIPSSSDNSEGSGGSALLWLAVITSISLLIALNVGGSSLFNP 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00264 665 CDD C2 402 496 - -
Gma12g00264 665 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 21 665 - -
Gma12g00264 665 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 187 374 IPR031468 GO:0008289
Gma12g00264 665 Pfam C2 domain 400 496 IPR000008 -
Gma12g00264 665 MobiDBLite consensus disorder prediction 611 633 - -
Gma12g00264 665 ProSiteProfiles C2 domain profile. 387 503 IPR000008 -
Gma12g00264 665 MobiDBLite consensus disorder prediction 548 569 - -
Gma12g00264 665 Gene3D C2 domain 387 529 IPR035892 -
Gma12g00264 665 SMART C2_3c 401 502 IPR000008 -
Gma12g00264 665 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 400 528 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00264 Gma-Chr12 2123001 2129913 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00264 377 580 Lipid Metabolism Gene Families AT3G61300 24.757 1.80e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00264 - - gmx:100806668 1254.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00264 12 2123001 2129913 Gma11g00944 11 7975856 7984222 GST