Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00255 ATGAAGAACCTGAACATCTCTTTGTGCATGCTTCTCGTAGCTCTTGTGCGGTTAGGGGGAAGTGCACCCTCTGGCTTCAACTATGGTGATGCTCTTGATAAGAGTTTGATGTTCTTTGAAGCACAGAGGTCTGGTAAGTTACCACTGCCGCAGCGAGTCAAATGGCGTGGTGATTCTGGTCTCCAAGATGGATTTCAACAAGGAGTAGACCTGGTGGGTGGGTACTATGATGCAGGAGATCATGTGAAATTTGGGTTGCCAATGGCCTACAGTGTCACAATGCTTGCATGGGGGGCCATTGAGTTCAACAAGGAAATCGCTGACTTGAACCAAATGGGACAGGCATTATGGGCAATTAAATGGGGAACTGACTACTTTATCAAAGCTCACACTCAGCCTAATGTTCTTTGGGGACAGGTGGGAGATGGAGTTTCTGATCATTACTGCTGGGAGCGTGCTGAAGACATGACAACTTCAAGAGGTGCCTACAAAATTGATGAACAACACCCTGGCTCAGATCTGGCAGGTGAAACTGCAGCTGCATTGGCTGCTGCAGCTATAGCTTTCAGGCCCTACAACTCTTCTTACTCTAATCTCCTGCTAGTTCATGCAAAACAGCTCTTCACATTTGCAGATAGGTTCAGAGGTCTCTATGATGACTCCATATCAAGTGCTCAGCAATTCTATACTTCTTCCGGTTACTCGGATGAATTGTTGTGGGCTGCCACTTGGCTGCACCAAGCAACCGGTGATGAATACTACATAAAGTATGTAGTGGACAATGCTATGTATATGGGAGGAACTGGCTGGGCAGTAAAAGAGTTTTCTTGGGACAACAAATATGCTGGTGTGCAGATCCTCCTATCAAAGGTGTTACTAGAAGGAAAGGCTGGTGCTTACGCTGCCACACTAAAGCAATACCAGGCCAAGGCAGAATATTTTACCTGCGCTTGCTTGCAAAAGAATGATGGTTACAATGTCCAAAAAACACCAGGTGGCTTACTATACGTGCGTGATTGGAACAACATGCAGTATGTTTCTTCTGCTGCATTCCTTTTAGCTGTTTACTCTAATTACCTATCAGCAACAAAATCACAGCTCAACTGTCCAGATGGACAAACTCAGCCTCAGGAGCTCCTCAATTTTGTCAAGTCACAGGCTGACTATATCCTTGGTAAAAACCCTGCGGATGTGAGCTACTTGGTAGGATATGGAGCAAAATATCCTCTTCATGTTCACCACAGAGGTGCTTCCATTGCTTCAATCTTTGCTCTACACTATGAGGTTGGCTGCACCCAAGGATTTGAGACGTGGTATAACCGTGCTGAGCCAAATCCTAATGTCATCTGCGGTGGCCTCGTGGGTGGTCCAGATAAAAATGATGACTTCTCTGATGAAAGATCCAATTATGAACAAACTGAGCCTACAATTTCAGGTTCTGCTCCTCTTGTAGGCATCTTCGCTAAACTGCAGAGTTTGTATGGTAATCATAATATAGGTGAAGGTTACAACCATAATGAATCACCAGTGCCCCAGCAAAAAACACCAAGTACAAATCCAGGGAAAGCAACAGTGTCCAAGACATCATCAGAATCAGAAGGTGCCGCAGTTGAATTCCTTCACTCGATAAGTAGCTCATGGACTGTTGGAGGTGCAACTTATTACCGTCACAGGGTGATAATCAAGAACACTTCTTCAAAGCCAATCTCAGATCTTAAGTTGGTGATTAAGGATCTCTCAGGGTCTTTATGGGGTCTCTCTCCAACAGAAGAAAAGGACACCTATGAACTTCCTCAATGGCACAAGGTCTTGAATCCTGGCTCCGAAAGTATATTTGTATATGTTCAAGGCGGACCCCAGGCTAAAGTCTCGATTAAAAGCTTACATTGA 1890 0.4487 MKNLNISLCMLLVALVRLGGSAPSGFNYGDALDKSLMFFEAQRSGKLPLPQRVKWRGDSGLQDGFQQGVDLVGGYYDAGDHVKFGLPMAYSVTMLAWGAIEFNKEIADLNQMGQALWAIKWGTDYFIKAHTQPNVLWGQVGDGVSDHYCWERAEDMTTSRGAYKIDEQHPGSDLAGETAAALAAAAIAFRPYNSSYSNLLLVHAKQLFTFADRFRGLYDDSISSAQQFYTSSGYSDELLWAATWLHQATGDEYYIKYVVDNAMYMGGTGWAVKEFSWDNKYAGVQILLSKVLLEGKAGAYAATLKQYQAKAEYFTCACLQKNDGYNVQKTPGGLLYVRDWNNMQYVSSAAFLLAVYSNYLSATKSQLNCPDGQTQPQELLNFVKSQADYILGKNPADVSYLVGYGAKYPLHVHHRGASIASIFALHYEVGCTQGFETWYNRAEPNPNVICGGLVGGPDKNDDFSDERSNYEQTEPTISGSAPLVGIFAKLQSLYGNHNIGEGYNHNESPVPQQKTPSTNPGKATVSKTSSESEGAAVEFLHSISSSWTVGGATYYRHRVIIKNTSSKPISDLKLVIKDLSGSLWGLSPTEEKDTYELPQWHKVLNPGSESIFVYVQGGPQAKVSIKSLH 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00255 629 SMART CBM49_2 537 617 IPR019028 GO:0030246
Gma12g00255 629 PANTHER ENDO-1,4-BETA-GLUCANASE 10 584 - -
Gma12g00255 629 MobiDBLite consensus disorder prediction 500 530 - -
Gma12g00255 629 SUPERFAMILY Six-hairpin glycosidases 25 497 IPR008928 GO:0005975
Gma12g00255 629 Pfam Glycosyl hydrolase family 9 28 486 IPR001701 GO:0004553|GO:0005975
Gma12g00255 629 Gene3D - 25 494 IPR012341 GO:0005975
Gma12g00255 629 Pfam Carbohydrate binding domain CBM49 538 616 IPR019028 GO:0030246
Gma12g00255 629 PANTHER ENDOGLUCANASE 5 10 584 - -
Gma12g00255 629 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 389 415 IPR018221 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00255 Gma-Chr12 1982782 1986812 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00255 26 627 Glycoside Hydrolase AT1G48930 68.439 0.0 823
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00255 K01179 - gmx:100802420 1290.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00255 12 1982782 1986812 Gma11g00931 11 7777701 7781935 GST