LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma12g00245	ATGCTGCTCACTTTCTGGACCCTGCTTTTTTCCTTCCTCCTAACCACTGCCTCCGCCGCTGCCGGAAGGGAATATTCCGGCGAAGAGGCGCcacagcaggaggctgacagagtgaagaacttgccaggacaaccgccggtgaaattcagacactacgctggttatgtcaagctaaggccaaatgaagagaaggcattgttctactggttcttcgaagctcaagaagatccctcacaaaagcctcttgtactttggcttaacggagGACCTGGTTGCTCGTCCATTGCCTTTGGAGCAGCACGAGAGATTGGTCCATTTCTTGTCCAAGACAAAGAACGCGTCAAACTTAACAAATTCTCTTGGAACAGAGTTGCAAACATCATATTCTTGGAGGCACCGATTGGTGTCGGGTTTTCTTACACTAACAATTCCAAAGATTTACATGAACTTGGGGATCGAGTTTCTGCCATTGATAACTATGCCTTCTTGTTTGGTTGGTTCAAAAGGTTCCCTAACTTCAGATCCCACGACTTTTATATTACAGGAGAGAGCTATGCAGGGCATTATGTTCCACAGCTCGCCGACCTTATCTATGAAGGAAACAAAGATACCAAAAAAGGCTCTTACATAAATATCAAGGGATTCATGGTGGGAAATGCTGTGATTAATGATATTACAGATATAGTGGGTTTGGTTGATTATGCTTGGAGCCACGCCATCATCTCAAACCAAGTATTTGCTGGGTTAACGAGAGATTGTAATTTTAGTATAGAGAACCAAACAAGGAGTTGCGATTTGCAAATTGCTAAGTTATTGGGAGCTTACAGCGATATTGACATATACAGCATTTACTCGCCCATTTGCCTCTATGACTACCAAAGACCACTTTCAGCCAAACTTGTCGTTGCTCCCCATCTTCTTACACGTCATGACCTGTGGCGTACACTACCATCAGGATACGATCCCTGTGCAGAAGATCTTGTTGGCAAATATTTCAATAATAAGGATGTTCAGAAGGCCCTCCATGCAAACATCACCAACTTGTCGTACCCCTATAGCCTTTGCAGCTCGGTAATTGAGAAATGGAATGACTCGCCAAAGACAATTCTGCCAGTTATTCAGAAGCTCCTACGTGCCGGTTTACGCATTTGGATATACAGTGGGGATGCGGATGGTCGAGTTCCAGTGACATCAACAAGATACAGCATAGAGAAGATGAGATTGAAAGTAAAGAAAGAGTGGAGAGCTTGGTTTGTGAAGAGTCAAGTGGCAGGGTGGACGGAGGAGTACGAGGGTGGCCTCACCTTTGCTACCATTAGAGGTGCTGGCCACCAGGTTCCTGTCTTTGCACCAGAGCAAGCTCTTTCTCTTTTCACACATTTCCTCTCTTCTCAAACCCTCCCATCTTCTCGCTTCTAG	1419	0.3946	MLLTFWTLLFSFLLTTASAAAGREYSGEEAPQQEADRVKNLPGQPPVKFRHYAGYVKLRPNEEKALFYWFFEAQEDPSQKPLVLWLNGGPGCSSIAFGAAREIGPFLVQDKERVKLNKFSWNRVANIIFLEAPIGVGFSYTNNSKDLHELGDRVSAIDNYAFLFGWFKRFPNFRSHDFYITGESYAGHYVPQLADLIYEGNKDTKKGSYINIKGFMVGNAVINDITDIVGLVDYAWSHAIISNQVFAGLTRDCNFSIENQTRSCDLQIAKLLGAYSDIDIYSIYSPICLYDYQRPLSAKLVVAPHLLTRHDLWRTLPSGYDPCAEDLVGKYFNNKDVQKALHANITNLSYPYSLCSSVIEKWNDSPKTILPVIQKLLRAGLRIWIYSGDADGRVPVTSTRYSIEKMRLKVKKEWRAWFVKSQVAGWTEEYEGGLTFATIRGAGHQVPVFAPEQALSLFTHFLSSQTLPSSRF	472

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma12g00245	472	SUPERFAMILY	alpha/beta-Hydrolases	33	469	IPR029058	-
	Gma12g00245	472	Pfam	Serine carboxypeptidase	42	463	IPR001563	GO:0004185\|GO:0006508
	Gma12g00245	472	ProSitePatterns	Serine carboxypeptidases, serine active site.	180	187	IPR018202	GO:0004185
	Gma12g00245	472	Gene3D	-	323	360	-	-
	Gma12g00245	472	Gene3D	alpha/beta hydrolase	32	290	IPR029058	-
	Gma12g00245	472	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	24	465	IPR001563	GO:0004185\|GO:0006508
	Gma12g00245	472	ProSitePatterns	Serine carboxypeptidases, histidine active site.	434	451	IPR033124	GO:0004185
	Gma12g00245	472	Gene3D	-	369	463	-	-
	Gma12g00245	472	PRINTS	Carboxypeptidase C serine protease (S10) family signature	117	129	IPR001563	GO:0004185\|GO:0006508
	Gma12g00245	472	PRINTS	Carboxypeptidase C serine protease (S10) family signature	130	140	IPR001563	GO:0004185\|GO:0006508
	Gma12g00245	472	PRINTS	Carboxypeptidase C serine protease (S10) family signature	166	191	IPR001563	GO:0004185\|GO:0006508
	Gma12g00245	472	PRINTS	Carboxypeptidase C serine protease (S10) family signature	434	447	IPR001563	GO:0004185\|GO:0006508
	Gma12g00245	472	PANTHER	SERINE CARBOXYPEPTIDASE-LIKE 35	24	465	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma12g00245	Gma-Chr12	1901137	1906711	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma12g00245	328	467	Calmodulin-binding Proteins	AT2G22960	30.496	5.59e-15	71.2

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma12g00245	K16297		-	gmx:100799746	937.176