Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00233 ATGGCTGATACCAGTTCCGTGGATGCGTCTCTGTGGTGGGACTCATTCACTGTCCTCTTCTCTGAGCTTGAAAATTCCTCTCTGACCTCAGATCTCCCACCGAATTTGGCGAAGAAGTTGAAAGACAACCATGCCTGGTTCGTGGACACACTGACGCGCTTCAAACCGCCCAATCAGAGTTCAAAGGAAGCTTTGAGTTCAAAAACGCTGAAAATTGGATCTCACCAACTCACTATTCAACCTCAGCTGAAAGATACAGCGTTGCAGATTAGCTCCTGTCTGCTACTAGACGAGGTTCAATCATACATTCTTGTCGAAAGGTCCATCAAACACAACAATGCTGCTGTGGCTGATTCCATGGCTCCAGAGTTTCTTTACATGATGTTAGTTCAATATTACAAGGAGCGACAGTGCTTGCTAAAGTGCATCAGGTGGATTCTCATGCATGCTATACACAATGGTTATGTGGCTGAAGACAATACTATGAAGGAGGAGGCAAGAAAACTGTTTCATGATGGACTGGAAAATAAATTAATATTGTTCTTTAGCAATCTTTTGTCATGTAGTTTCCCAGAGCAAATGGATGTTGATCTTTTTACTCTGTGGGCTGAGGAGACTCTAATTGAAGACAACTTGGTTTTAGATATCCTTTTCCTAGCATATTATGATTCGTTTTGTACCTGTAGCAGTGAAATGTGGAAGAAGTTTATTTCTCTTTACAAGGGGATCTTAGCTGGTGATTATAATTTGGGAAAGCTATCAATTACAACAGAAACACAACAGTTGTCTTATCATGCTAAAGTTCAGCTGCTGCTTATTTTAATAGAAACCCTGAACCTGGAGAATGTTCTTCAAATGGTTCATGATGAAGTACCTTACAGGAAAGGCGTGTCTACATTTTCCATGACTGATGTTCAAGAAATGGATGCACTAGTTTCTACATTCAATGCTTTTGAAATGAAAGAAGCTGGTCCTCTAGTTCTAGCATGGGCAGTATTTCTTTATCTACTCTTGACACTTGTGGAAAAAGATGAAAATAATGAGCTAATGGAGATTGATCACATTAGTTATGTTCGTCAAGCCTTTGAGGCTGGATCCTTGCGTTATTGTCTTGAAATTCTTGAATGTGACATTTTGAAGGAATATGATGGCCCAGTGTCTGGATATCGCGGTGTTTTGAGGACATTTATATCTGCATTTGTTGCATCTTATGAAATCAACCTTCAGCCTGAGGACAGTAACCCCACTTTGATGCTGGATATTCTTTGCAAGATTTACCGTGGAGAGGAATCATTGTGTATTCAGTTTTGGGACAAGGAAAGTTTTATTGACGGTCCAATTCGGTCTCTTCTTTGCAACCTAGAGAGTGAGTTTCCTTTCAGGACACTCGAACTTGTACAACTCCTGTCATCCCTTTGTGAAGGAACTTGGCCTGCAGAGTGTGTGTATAACTTTCTAAATAGGTCTGTTGGTATATCATCCTTGTTTGAGATTAGTAGTGATTTGGAGGTAGTTGAGGCACAACAGGCAGTGCAAGTTCCTGGGGTTGAAGGTTTCTTTATTCCAGCTGGAACTCGTGGTAGTGTCTTGAGAGTTGTTGGAGAGAACACTGCCCTTGTACGATGGGAGTATTCACCATCTGGAATGTTTGTGTTACTCCTACATTTGGCCCAAGAGATGTATTTGAATAGCAAGGATGGAGTTGTTTATACTCTTGACCTGCTTAGTAGATTGGTGTCTTTTAACACTGGTGTTTGCTTTGCTGTGATGGACATCAGCAACTCTCTGCTATTTCATGATGTTGGTTTGATGGATGAGCAGGTTGAAAAGAGGGTCTGGGTAGTTGACATAATATGCAATCTTGTAAAAAACCTGACTCTGAATTCCTGCGGTGCTGCACTTATGTCAATGGGTGTCAAGATTTTGGGGATTATGTTGATTTGTTCTCCAGCTAATGTTGCAGCAACCACTCTAAATGCAAATCTTTTTGATATTACTTTGCAGACACCTACGTTCAACGTAGGCAGTAATGGTTTGTCAAGTGGGTCATGGTTGCTTTCTTGCAAACTGGCTAGGATGCTTTTAATTGACTGTGAGCAAAACAGTAATGACTGCCCCTTGGCAATATCAGTGCTGGACTTCACCATACAGCTTGTAGAAACAGGAGTAGAGCATGATGCTCTCCTGGCATTGATCATTTTCTCTTTGCAGTATGTCCTAGTCAATCACGAGTATTGGAAATACAAGATGAAACATATTAGATGGAAAATAACATTGAAGGTTCTTGAGTTGATGAAAAAATGCATTTCATCAATGCCTTATTATGGAAAATTGGGTGAGATCATAAACAACGTGTTGTTCTCTGATTCTTCCATCCATAACACACTATTCCAAATTGTTTGCACTAATGCACATGCTTTGGAGAAATTGCATGTAAGCCGCCTCTTTGATCCAATGGAAATTGAAGGGTTACAGCTTGCTATAGGTTCTGTTTTAGATATTCTTTCAGTCATGTTGACCAAACTTTCTAAGGATACATCATCGAACTTTCCAGTTTTTCTCCAAGCATTGTTCTCATGCACAACCAAACCGGTTCCTGTTGTCACTTCTGTTATGTCCCTGATTTCATACTCTCAAGATCCTGCCATCCAATTCGGTGCTGTTAGGTTTATTTCAATGTTATTTGCCATAGCAGATTGTATTCAACCATTTTCATATGGAATCACATGCTTCATTCCAGATAATGAGATCATGGATTTGAGGCACTCTGTGAACTACATACTGCTTGAGCAATCAGAATCAAATGAAGATCTCTTTGTTGCTACAGTCAATCTGTTTACTTCTGCTGCACATTACCAGCCTTCTTTCATTGTTGCTATCTTTGCTCTAGAGGAGAACACTGAAGGCCACTTGAGCATTGGTGATGCAAAGCTGCAAAAAAAGGAAACTTCTCCTACAACTGTAGTTTCTAAAAGATCAAGTCTTGTAGATGCACTTATGCACTATATTGAAAGGGCAGATGATCTGATCAAGAGCAATCCCCGCATACTGCTTTGTGTACTTAACTTCATGATTGCCTTATGGCAAGGGGCTCCCCATTATGCCAATCTCTTGGATGCTTTAAGAAGGCATGGAAAGTTTTGGGAACACTTGGCCAATGCAATCTCTAACATTGCTAGCAGTGAAATTCCCTTACTTAGGAGTCTTGAAGAAAAAGATGCTTTCAATCTGGCTTACTGTTTCCATTGTCAATCTTCCATACATGGAATCATGGCTTATGAATTATTCTTGCACAAGAAGTTGTTTCATGCAGAGTCACTTGTGAAGGATGTAGCTGAATCCAAGGACAAGGAGCAAAATGCCTCAAAAACAGAAAAATCCAAAGCACCAGATCTTCAGGATCTTAAGGGAATCTGGTCTTCATGGTTCAACGACTCTATTTTAGAGAAACTAATAAAGTCATACACTTCTTGTGGATATAATAATGATATATATGGTGGTGCAAAGGTCGCCACCAGTTTATTCTCTGTTCATGTGATGATGAAATTAGCAGTTTGTGACTCTGGAAGTATATCTGTGTTATTGCTTCAGAAGATTCATGAAATTCTGACGAAGCTCAGCATTCATCCTGCTTTCTCTGAATTGGTGTCTCAGTATTCACAACGTGGTTACAGTGAAGGGAAGGAACTAAAGAAATTGATACTCAGTGACCTCTTTTATCATTTGCAAGGAGAACTTGAAGGGAGGAAAATTGATATTGGCCCATTCAAAGAATTATCTCAGTATCTTGTCGAATCAAATTTTTTGGGAACGTATCAACACCTGTTCAATGAAGACTCTTTTACAAAGAACATGTTTACAAAGAATGTGTACTTGTTTGACCTTGCACACTTGCGAGAAGATTTGAGATTAGATTTGTGGGATTGTTCTAATTGGAAAACATCCAAGGAGATTGCAGAAACCATGCTGCGTTTCCTGCAGGATGCAAACTCAGTTATGTTGCTTTCAAGTTCAAAGCTTTCTGCTTTGAAAGGACTGATAGCTGTTTTGGCTGTCAACCATTATGATTCACAAGGGAGGGCTACAACTGGAGGGAGAATTTCAGATGAACTCATATTCGCTTTCATGGATAATATATGCCAATCTTTCCTTGCTACCATAGAGACATTATCATCTGTTCTAGACGCCTCTGAGGATATTCTTAACTTTCTTGCATGTCAAGCAGAATTACTCCTCCAGTTGACAAGAACTGTCTGTAAAAGCCTCTCCTTACATGTATCCCTACTTGTTCTGAAATGTGCTAGTTCAGGTCTTAAACTATTGAGTGCACTTAAGCCTTTACCTTCTGAGGCTAATCTGATCATGAAACTTTTACTCACATTGCTGCTTTCAGTACTACAGTCCGACTCCCTTAATGCGCATTCAGATGGGGCAACTGATGAGAGTTCTGGTGAGGACTTCTCAAAGGTTTCAAATGCAACCCTGGGACTACTACCCATTCTTTGCAACTGCATTGCAACTTCTGAGCATTGCATGCTATCCCTATCAGTTATGGACTTGATATTGAGACGCTTCTTGACACCCAGGACTTGGTTACCTGTCCTGCAGAATCATCTCCAACTGCCAATTGTTATGCTGAAACTCCATGATAAAAATTCTGCCTCTATTCCAATAATAATGAAGTTCTTTTTGACCCTTGCACGGGTTAGAGGAGGTGCTGAGATGCTTTATTGTTCTGGCTTCTTGTCATCTTTAAGAGTGCTATTTGCTGAATCCGGTGAGGATTTCTTGAGAATTGGTAGTGAGAATCTGGGCAGCTCATGTGAGAAGTTTGTAATACCGCAGGATATTTGGGGTCTTGGATTAGCTGTGGTTACTGCTATGGTTAAATCCTTGGGAGACAATTCTTCTGGCACCGCTATTGTGGACAGCATGATACCGTACTTTTTTTCAGAGAAAGCTCGTCTTATTTTTAATTCTCTAAATGCCCCAGACTTTCCTTCTGATGATCATGACAAGAAAAGACCTCGGGCACAGAGGGCATGGATTTCTTTAGCTACTCTTAAAGAAACTGAACATACTTTGATGCTCATGTGTGAGCTAGCAAAACATTGGAATTCATGGATTAAGGCAATAAGAAATGTGGATAGACAGCTTAGAGAGAAGTGTATCCATCTTTTAGCCTTCATTAGCAGGGGATCTCAACGCCTTAGTGAATTGTCAAGCAGAAATGCCCCTCTTTTATGTCCACCTACTGTGAAAGAGGAATTTGAAATTTGCTTAAAACCTTCTTATGTCAATAGCAAAAATGGATGGTTTGCTCTTTCACCACTCGGATGTGTGCCAAAACCGAAGATCTCTTCTTTCTCAACTGCATTATCTACCTATGGTCAAGCAACTGAGAGTAGGAATCCTGCTTCAAAAACAGGCTTCTCTGATACTGTTGCCTTGCAGGTATATAGAATAGCATTTCTCCTTTTAAAGTTTCTTTGTTTACAAACTGAGGGTGCTGCTAAAAGGGCTGAGGAAGTTGGGTTTGTTGATCTTGCACATTTTCCTGAGCTTCCAATGCCAGAAATCTTGCATGGACTGCAGGATCAAGCTATTGCCATTACTACGGAGCTCTGTGAAGCCAACAAACTAAAGGTCTCCCCAGAAACACAGGATGTTTGCAACTTATTGTTGCAAATACTTGAAATGGCCTTGCACTTGGAACTTTGTGTTCTACAAATTTGTGGCATAAGACCTGTATTAGGACGTGTGGAGGATTTTTCAAAGGAAGCCAAATCTTTATTTAGTGCATTGGAGGGTCATGCTTTTCTAAAAGCATCTTGCAACTCTCTAAAACAGATGATATCGTGTGTCTATCCCGGATTGCTGCAGGGAGAGAATTTCATATAA 5901 0.4023 MADTSSVDASLWWDSFTVLFSELENSSLTSDLPPNLAKKLKDNHAWFVDTLTRFKPPNQSSKEALSSKTLKIGSHQLTIQPQLKDTALQISSCLLLDEVQSYILVERSIKHNNAAVADSMAPEFLYMMLVQYYKERQCLLKCIRWILMHAIHNGYVAEDNTMKEEARKLFHDGLENKLILFFSNLLSCSFPEQMDVDLFTLWAEETLIEDNLVLDILFLAYYDSFCTCSSEMWKKFISLYKGILAGDYNLGKLSITTETQQLSYHAKVQLLLILIETLNLENVLQMVHDEVPYRKGVSTFSMTDVQEMDALVSTFNAFEMKEAGPLVLAWAVFLYLLLTLVEKDENNELMEIDHISYVRQAFEAGSLRYCLEILECDILKEYDGPVSGYRGVLRTFISAFVASYEINLQPEDSNPTLMLDILCKIYRGEESLCIQFWDKESFIDGPIRSLLCNLESEFPFRTLELVQLLSSLCEGTWPAECVYNFLNRSVGISSLFEISSDLEVVEAQQAVQVPGVEGFFIPAGTRGSVLRVVGENTALVRWEYSPSGMFVLLLHLAQEMYLNSKDGVVYTLDLLSRLVSFNTGVCFAVMDISNSLLFHDVGLMDEQVEKRVWVVDIICNLVKNLTLNSCGAALMSMGVKILGIMLICSPANVAATTLNANLFDITLQTPTFNVGSNGLSSGSWLLSCKLARMLLIDCEQNSNDCPLAISVLDFTIQLVETGVEHDALLALIIFSLQYVLVNHEYWKYKMKHIRWKITLKVLELMKKCISSMPYYGKLGEIINNVLFSDSSIHNTLFQIVCTNAHALEKLHVSRLFDPMEIEGLQLAIGSVLDILSVMLTKLSKDTSSNFPVFLQALFSCTTKPVPVVTSVMSLISYSQDPAIQFGAVRFISMLFAIADCIQPFSYGITCFIPDNEIMDLRHSVNYILLEQSESNEDLFVATVNLFTSAAHYQPSFIVAIFALEENTEGHLSIGDAKLQKKETSPTTVVSKRSSLVDALMHYIERADDLIKSNPRILLCVLNFMIALWQGAPHYANLLDALRRHGKFWEHLANAISNIASSEIPLLRSLEEKDAFNLAYCFHCQSSIHGIMAYELFLHKKLFHAESLVKDVAESKDKEQNASKTEKSKAPDLQDLKGIWSSWFNDSILEKLIKSYTSCGYNNDIYGGAKVATSLFSVHVMMKLAVCDSGSISVLLLQKIHEILTKLSIHPAFSELVSQYSQRGYSEGKELKKLILSDLFYHLQGELEGRKIDIGPFKELSQYLVESNFLGTYQHLFNEDSFTKNMFTKNVYLFDLAHLREDLRLDLWDCSNWKTSKEIAETMLRFLQDANSVMLLSSSKLSALKGLIAVLAVNHYDSQGRATTGGRISDELIFAFMDNICQSFLATIETLSSVLDASEDILNFLACQAELLLQLTRTVCKSLSLHVSLLVLKCASSGLKLLSALKPLPSEANLIMKLLLTLLLSVLQSDSLNAHSDGATDESSGEDFSKVSNATLGLLPILCNCIATSEHCMLSLSVMDLILRRFLTPRTWLPVLQNHLQLPIVMLKLHDKNSASIPIIMKFFLTLARVRGGAEMLYCSGFLSSLRVLFAESGEDFLRIGSENLGSSCEKFVIPQDIWGLGLAVVTAMVKSLGDNSSGTAIVDSMIPYFFSEKARLIFNSLNAPDFPSDDHDKKRPRAQRAWISLATLKETEHTLMLMCELAKHWNSWIKAIRNVDRQLREKCIHLLAFISRGSQRLSELSSRNAPLLCPPTVKEEFEICLKPSYVNSKNGWFALSPLGCVPKPKISSFSTALSTYGQATESRNPASKTGFSDTVALQVYRIAFLLLKFLCLQTEGAAKRAEEVGFVDLAHFPELPMPEILHGLQDQAIAITTELCEANKLKVSPETQDVCNLLLQILEMALHLELCVLQICGIRPVLGRVEDFSKEAKSLFSALEGHAFLKASCNSLKQMISCVYPGLLQGENFI 1966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00233 1966 PANTHER NUCLEOPORIN NUP188 HOMOLOG 3 1959 IPR044840 GO:0017056
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00233 Gma-Chr12 1808494 1830303 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00233 K14311 - gmx:100796560 3787.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00233 12 1808494 1830303 Gma12g00233 12 1808494 1830303 ECH
Gma12g00233 12 1808494 1830303 Gma11g00909 11 7614220 7621471 GST