Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00227 ATGGATTGGTGTCAAAATCAAAACGGAAGTTTTAAAAGTACAGATGCACTATGTATTGCGGCAGAAGCTGATGAGGAGGAACTTGATTTCACAAAGGTAGACAAGCCAAGGCCTATAGAAAGATGCAAATCATGCGAAGTAAGATCACTAAGTGAACTGTCCAAAGTTTCTGAGAACTCTTCTTACTCAATAGACCATCTTGATAAGGCAGCTTCTCTTCAGCCAAAATCGGGTATGAATACCCCAGGATCATTGGTATTGGATCCACAATCACATCCAATAGTATCTGAAGGctgggaagctctgatgcgttccttggtgtattttcgtggtcagcgtgttggtacaattgctgctatggatagttctgatgagaaaatcaattacgaccagGTGTTTGTAAGAGACTTTGTCCCTAGTGCTTTGGCTTTTCTGATGAAGGGGGAACCTGAAATTGTTAGAAATTTTATCTTGAAGACCCTTCGCCTTCAATCATGGGAGAAAATGATTGATAAGTTTCACCTAGCAGAAGGAGTAATGCCAGCAAGTTTTAAAGTACTTCATGATCCAGTCAGAAACCATGAGACCTTGATAGCAGACTTTGGTGAAAGTGCAATAGGCCGGGTTGCTCCTATTGATTCGGGATTTTGGTGGATTATATTACTTCGTGCATACACAAAGTCTACAGGAGACAATTCCTTGGCTGAACTGCCTGAATGTCAGAAGGGCATGCGCTTGATTTTGAATTTATGCCTTTCAGAGGGATTTGACACCTTCCCCACTCTACTATGTGCGGATGGATGCTGCATGATAGATCGTAGAATGggtgtttatggttatccaattgagattcaagcacttttcttcatggctttaaggtgtgCCTTGATATTGCTAAAGGAAGATGCTGAAGGCGAGGAGTTCAGAGAAAGAATTACCAAACGATTGCATGCCTTAAGCTATCACCTGAGAAGCTATTTTTGGTTGGATTTGAAGCAACTTAACAATGTATATCGCTTCAAAACAGAAGAATACTCACATACTGCAGTCAACAAGTTTAATGTCATTCCTGATTCTCTACCTGATTGGATTTTTGATTTCATGCCACTTAAAGGTGGTTACTTTATTGGGAATGTCAGTCCTGCTAGGATGGATTTCCGTTGGTTTTGCCTTGGTAATTGCATAGCTATTTTGTCCAGCTTGGCTACTCCTGAGCAATCCATTGCAATCATGGATCTCATTGAATCTCGGTGGCAGGAACTGATTGGGGAGATGCCACTAAAAGTTTGTTATCCAGCCCTTGAAAACCATGAGTGGCGAATCATAACTGGATGTGACCCAAAAAACACTAGATGGAGTTACCACAATGGAGGATCTTGGCCAGTTCTATTATGGCTTCTTGCTGCTGCCTCTATCAAGACAGGACGACCCCAAATTGCAAAACGTGCCCTTGAAATTGTTGAAACTAGGTTGTTCAAGGACAACTGGCCCGAATATTATGATGGAAAGCTTGGTCGTTATATTGGGAAGCAAGCCCGCAAATGCCAAACTTGGTCCATTGCTGGTTACTTGGTGGCTAAGATGTTGTTGGACGATCCATCACATTTAGTTTGTTCCAATCCAACGTTGGTTGTGTGTGTTTGTGTTGGGAGGATTGGGATTGGGATTGGAATCAGCGACCCCATGAGACCTCAGAGAACGTCGATCCACGCCGTCACGACATGGGTGAGGCGACAGCCCCCAAAGGTGAAGGCTTTTCTCGCCGTCGTTTCCGGCATGGCGGCCCTCGTCCTCCTTCGCTTCATCGTCCACGATCACGACAACCTCTTCGTCGCTGCCGAGGCTGTCCACTCCCTCGGAATTTCCGTCCTCATCTACAAGCTCATGAAGGAGAGGACATGTGCTGGGTTATCACTCAAATCCCAGGAATTAACGGCTATCTTTTTAGCTGTTAGGCTGTACTGCAGTTTTGTCATGGAATATGATATCCACACCTTACTTGATTTCGCTACTTTCGTAACAACGCTCTGGGTTATATACATGATTCGTTTTAAGCTGAAGGCTAGCTACATGGAAGAGAAGGATAACTTTGCAATATACTATGTGGTGGTACCCTGTGCTGTGTTAGCCTTGCTCATTCATCCATCAACTTCTCATCATTTATTAAACAGGATTTCCTGGGCATTCTGTGTATATCTAGAAGCTGTCTCAGTCCTGCCCCAACTGCGGGTCATGCAGAACACCAAGATTGTTGAACCTTTCACAGCTCATTATGTATTTGCATTGGGTGTTGCAAGATTCTTGAGCTGCGCTCATTGGGTTCTTCAGGTGTTAGATAGCCGTGGGCATTTGCTGGTGGCCTTGGGGTATGGTTTATGGCCATCAATGGTTCTTATCTCGGAAATTGTCCAGACCTTCATCTTAGCAGATTTCTGTTACTATTATGTCAAAAGTGTCTTCGGGGGACAACTTGTTCTACGTCTTCCCTCTGGAGTGGTGTGA 2502 0.4125 MDWCQNQNGSFKSTDALCIAAEADEEELDFTKVDKPRPIERCKSCEVRSLSELSKVSENSSYSIDHLDKAASLQPKSGMNTPGSLVLDPQSHPIVSEGWEALMRSLVYFRGQRVGTIAAMDSSDEKINYDQVFVRDFVPSALAFLMKGEPEIVRNFILKTLRLQSWEKMIDKFHLAEGVMPASFKVLHDPVRNHETLIADFGESAIGRVAPIDSGFWWIILLRAYTKSTGDNSLAELPECQKGMRLILNLCLSEGFDTFPTLLCADGCCMIDRRMGVYGYPIEIQALFFMALRCALILLKEDAEGEEFRERITKRLHALSYHLRSYFWLDLKQLNNVYRFKTEEYSHTAVNKFNVIPDSLPDWIFDFMPLKGGYFIGNVSPARMDFRWFCLGNCIAILSSLATPEQSIAIMDLIESRWQELIGEMPLKVCYPALENHEWRIITGCDPKNTRWSYHNGGSWPVLLWLLAAASIKTGRPQIAKRALEIVETRLFKDNWPEYYDGKLGRYIGKQARKCQTWSIAGYLVAKMLLDDPSHLVCSNPTLVVCVCVGRIGIGIGISDPMRPQRTSIHAVTTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSLGISVLIYKLMKERTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDFATFVTTLWVIYMIRFKLKASYMEEKDNFAIYYVVVPCAVLALLIHPSTSHHLLNRISWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKSVFGGQLVLRLPSGVV 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00227 833 Gene3D - 122 521 IPR012341 GO:0005975
Gma12g00227 833 Pfam Alkaline and neutral invertase 99 533 IPR024746 GO:0033926
Gma12g00227 833 Pfam ER lumen protein retaining receptor 633 775 IPR000133 GO:0006621|GO:0016021|GO:0046923
Gma12g00227 833 PANTHER ALKALINE/NEUTRAL INVERTASE B-RELATED 12 537 - -
Gma12g00227 833 SUPERFAMILY Six-hairpin glycosidases 107 526 IPR008928 GO:0005975
Gma12g00227 833 PANTHER - 12 537 IPR024746 GO:0033926
Gma12g00227 833 PRINTS ER lumen protein retaining receptor signature 727 747 IPR000133 GO:0006621|GO:0016021|GO:0046923
Gma12g00227 833 PRINTS ER lumen protein retaining receptor signature 609 628 IPR000133 GO:0006621|GO:0016021|GO:0046923
Gma12g00227 833 PRINTS ER lumen protein retaining receptor signature 636 656 IPR000133 GO:0006621|GO:0016021|GO:0046923
Gma12g00227 833 PRINTS ER lumen protein retaining receptor signature 749 763 IPR000133 GO:0006621|GO:0016021|GO:0046923
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00227 Gma-Chr12 1770396 1777689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00227 565 833 Miscellaneous Gene Families AT2G21190 88.104 1.46e-170 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00227 - - gmx:100796039 1105.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00227 12 1770396 1777689 Gma12g00227 12 1770396 1777689 ECH
Gma12g00227 12 1770396 1777689 Gma11g00902 11 7576973 7579789 GST