Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00218 ATGGAAGAAGTGGCTGAAGAAGCTCAATATTTCAGATCAGAAATAGCTCTGTTGAATTTCTCGGATGCCACCTTCAAACCCCCACTTTCTCCTCTGTTGATACACATTGATCCTCTCCTACCCAATGGTCACACTTGTTCTGCATCAGAATCTGATCCATCACCCACTTCACAGCATCAGCAGGAGCAGCATCATCCAAAAGATGCGTGGCTTCCAATCACTGAATCCAGAAATGGAAATGCCTATTATGCAGCCTTCCATATTCTTAATTCCAACATTGGATTCCAGGCTCTCATGCTTCCCGTTGCCTTCGCTACTCTCGGTTGGGCATGGGGTACAGTATGTTTGTCACTAGCATTTGTTTGGCAGCTCTATGCTATATTTCTTCTTGTTCAGCTTCACGAATACGTCCCTGGAATTCGTCACAGCAGATACCTCTTCCTTGCTATGGCTGCCTTCGGAAAAAAGTTAGGGAAGGTGGGAGCATTATTCCCCGTAATGTACCTTTCAGGAGGCACATGCGTCATGCTAATCATCACCGGAGGTGGGACCATGAAACAATTATTCAAGACGCTTTGCGAAAACGATAATGGGAAAACATGTAATGCCCATGCACTTAGCGGGGCTGAGTGGTTCTTGGTGTTTACCTGTGTCGCCATTCTTATTGCACAGTTGCCCAACCTCAACTCAATGGCCATGGTTTCTCTCGTCGGCGCGGTTACCTCTATCACTTATTGCACCCTCTTTTGGGTTCTCTCTGTTAAGAAGGGTAAGCCTAACAACGTATCCTATAGCTCATCCCTGTCCCAAGAACACACACCAGTTGCTAAGATCAGTGACGTTCTCAATGCCATTGGAATCATTGTCCTAGCCTTCAGAGGGCATAATGTTTTGCTCGAAATACAGGCAATGTTTTGGATGTTGGTTTTGCAGGGGACGCTGCCTTCAAATTTGGAACAAACATCCAAAATACCAATGCGAAGAGGAGTGAGCATGTCATATGTACTCATTTCCATGTGCATTAACGATGGAGGATTGTTATATTCGTTTCCAGAATTCCACAAGAGGCAAATCACAAAATTCTCTATGGGTGCCATATATGTTCTAGTAATAATACATTGTTTAACCAGCTTTCAAATATATGCGATGCCTGTTTTTGACAACCTGGAGATAAGATACACGAGCATAAAGAATCAGAGATGTTCACCATTAGTGAGAACATGCATAAGATTATTCTTCGGGGGGCTGACATTTTTTATCTCAGTCACGTTCCCTTTCCTTCCAAGACTATCAACACTACTTGGAAGCATGACCCTTGTGCCTATCACATATGCATACCCCTGTTTCATGTGGTTATCCCTCAAGAAACCTCGTCCAAGAGGTATAATTTGCTGCTTCAACGTTGCACTCGGTTCTGTAGGGATGCTTCTCAGTGCTCTTTTGGTAGCTGCAGCTATTCGGACTCTAGCTCTCAATGGCCTTGATGCTAACTTCTTCAGACCATAA 1506 0.4416 MEEVAEEAQYFRSEIALLNFSDATFKPPLSPLLIHIDPLLPNGHTCSASESDPSPTSQHQQEQHHPKDAWLPITESRNGNAYYAAFHILNSNIGFQALMLPVAFATLGWAWGTVCLSLAFVWQLYAIFLLVQLHEYVPGIRHSRYLFLAMAAFGKKLGKVGALFPVMYLSGGTCVMLIITGGGTMKQLFKTLCENDNGKTCNAHALSGAEWFLVFTCVAILIAQLPNLNSMAMVSLVGAVTSITYCTLFWVLSVKKGKPNNVSYSSSLSQEHTPVAKISDVLNAIGIIVLAFRGHNVLLEIQAMFWMLVLQGTLPSNLEQTSKIPMRRGVSMSYVLISMCINDGGLLYSFPEFHKRQITKFSMGAIYVLVIIHCLTSFQIYAMPVFDNLEIRYTSIKNQRCSPLVRTCIRLFFGGLTFFISVTFPFLPRLSTLLGSMTLVPITYAYPCFMWLSLKKPRPRGIICCFNVALGSVGMLLSALLVAAAIRTLALNGLDANFFRP 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00218 501 MobiDBLite consensus disorder prediction 45 60 - -
Gma12g00218 501 Pfam Transmembrane amino acid transporter protein 361 485 IPR013057 -
Gma12g00218 501 Pfam Transmembrane amino acid transporter protein 78 303 IPR013057 -
Gma12g00218 501 PANTHER OS05G0424000 PROTEIN-RELATED 65 496 - -
Gma12g00218 501 PANTHER LYSINE HISTIDINE TRANSPORTER-LIKE 7 65 496 - -
Gma12g00218 501 MobiDBLite consensus disorder prediction 45 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00218 Gma-Chr12 1721612 1725651 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00218 65 501 Organic Solute Cotransporters AT1G47670 47.566 1.19e-137 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00218 - - gmx:100793408 975.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00218 12 1721612 1725651 Gma11g00892 11 7519060 7523303 GST