Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00209 ATGCACACTCTCCTCCGATCCACTCTCAGGACCAAGACTGCTTCATCTTTAGCATATGCTGCGGTTTCCAGAAGTGCTCAAGAAAATCTCCTTCAGGCTCCCTTATTGTCTAGATCAAATAGCACGGAGGCTTCCTTGGCAAAGGATACTTCCTCTAATGATGTGAAAAATGGTCAAGGGTTCAAAGGCCATAGTATGCTTGCTCCTTTCACGGCTGGGTGGCAGACTACTGATTTGCATCCTCTGGTCATAGAAAAGTCAGAGGGAAGCTATGTATATGACATTAATGGGAAGAAATATCTTGATGCACTGGCTGGTCTATGGGCCACTTCTTTAGGGGGAAGTGAGCCACGCCTTGTTGATGCTGCCATTGCACAATTAAAGAAGTTGCCATTTTACCATTCCTTTTGGAATCGAACCACATTACCTTCTTTGGATCTAGCCAAGGAACTCCTAGAAATGTTCACAGCCAGAAAAATGGGGAAAGCTTTTTTTGTTAACAGTGGATCAGAAGCCAATGACACTCAGGTGAAACTTGTATGGTATTATAACAATGCACTTGGAAGACCAGATAAGAAGAAATTCATAGCTCGTGCTAAATCGTATCATGGTTCAACACTGATAGCAGCCAGTCTTTCTGGCCTTCCGGCTCTGCATcaaaaatttgatttgccagctccttttgtattgcacactgactgtccacaTTACTGGCGGTATCATCTTCCAGGTGAGACAGAGGAAGAATTTTCAACCAGATTAGCCAAAAATTTGGAGCAGCTGATTCTGAAAGAGGGACCAGAGACAATTGCTGCATTTATTGCTGAACCTGTAATGGGGGCAGGAGGTGTAATAGTTCCACCATCAACTTATTTTGAGAAGGTCCAAGCCGTTGTCAAGAAGTATGACATTCTTTTTATTGCAGATGAGgtaatctgtgcctttggaaggcttgggacaatgtttggatgtgacaaatacaacattaagccagaccttgtatcccttgctaaggcactatcttctgcatatttgccaattggagctgtccttgtaagcccagaaatttcagacgttatacacgcacaaagcaacaaacttggttcattttctcatggttttacttattctggacaccctgcagcctgtgctgtggcaattgaagcactcaagatctataaGGAAAGAAATATTGTTGACCAAGTTAACAAGATTGCCCCAAGGTTCCAAGATGGCATAAAAGCTTTTTCTGACAGTCCCATCATTGGAGAGATACGGGGAACTGGCTTGATTCTGGGCACTGAGTTCACAGACAACAAGTCACCTAATGATCCGTTTCCTCCTGAATGGGGCAATTTGATGTATACTACAGGAGTAGGTGCCTATTTTGGAGCACAATGTGAGAAGCATGGGATGTTGGTTCGTGTAGCAGGGGATAACATCATGATGTCTCCTCCATATATTATATCTCAAGGAGAAGTTGATGAGTTAATCAGCATTTATGGGAAAGCTTTGAAAGAAACGGAAAAGAAGGTACAGGAACTCAAGTCTCAGCGCAAGTAG 1563 0.3493 MHTLLRSTLRTKTASSLAYAAVSRSAQENLLQAPLLSRSNSTEASLAKDTSSNDVKNGQGFKGHSMLAPFTAGWQTTDLHPLVIEKSEGSYVYDINGKKYLDALAGLWATSLGGSEPRLVDAAIAQLKKLPFYHSFWNRTTLPSLDLAKELLEMFTARKMGKAFFVNSGSEANDTQVKLVWYYNNALGRPDKKKFIARAKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYHLPGETEEEFSTRLAKNLEQLILKEGPETIAAFIAEPVMGAGGVIVPPSTYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYNIKPDLVSLAKALSSAYLPIGAVLVSPEISDVIHAQSNKLGSFSHGFTYSGHPAACAVAIEALKIYKERNIVDQVNKIAPRFQDGIKAFSDSPIIGEIRGTGLILGTEFTDNKSPNDPFPPEWGNLMYTTGVGAYFGAQCEKHGMLVRVAGDNIMMSPPYIISQGEVDELISIYGKALKETEKKVQELKSQRK 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00209 520 ProSitePatterns Aminotransferases class-III pyridoxal-phosphate attachment site. 306 343 IPR005814 GO:0008483|GO:0030170
Gma12g00209 520 Gene3D - 116 398 IPR015421 GO:0003824
Gma12g00209 520 Gene3D Aspartate Aminotransferase, domain 1 82 505 IPR015422 GO:0003824
Gma12g00209 520 SUPERFAMILY PLP-dependent transferases 66 507 IPR015424 -
Gma12g00209 520 CDD OAT_like 76 505 IPR005814 GO:0008483|GO:0030170
Gma12g00209 520 Pfam Aminotransferase class-III 81 504 IPR005814 GO:0008483|GO:0030170
Gma12g00209 520 Coils Coil 498 520 - -
Gma12g00209 520 PANTHER GAMMA AMINOBUTYRATE TRANSAMINASE 1, MITOCHONDRIAL 19 515 - -
Gma12g00209 520 PANTHER ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE AMINOTRANSFERASE 19 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00209 Gma-Chr12 1645855 1655072 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00209 K16871 - gmx:100792355 1019.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00209 12 1645855 1655072 Gma11g00884 11 7436504 7445916 GST