Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00208 ATGGTGAGAAAACATGGCTGGCAATTACCTGCTCACACTTTTCAGgttgttgcgatcactgtattctgcttattggtgattgctttctatgctttccttgctcccttcatcggaggaggtcatatatgggaatacaccttcattgctgtttactctcctgtggctctcattgtgttcattctttacgtcagatgcactgcaattaaccctgcagatccgggcattatgtctaaatttgaccctagagtgggaaataagttcaattctgctcacaatttatcagggaagcatcttggttcagaacatgaacgcgttgctgctagagagcaatattctccatcatctgctgcttccaaaaggtctatgacaaatatcagcaagaagagctcagtggaagatcttgacagagtagatagttcaaggaaagagattaaccaaaactcatgtaatgcaattggaggaattttctgcatattattttcacatgaagattgccggaaacaggaagcaacggctgatgagcagggtggtggtgaagatgctctgttctgcactttgtgcaatgctgagGTGCGCAAGTTCAGCAAACATTGTAGAAGTTGTGATAAATGTGTTGATGGCTTCGATCACCATTGTCGGTGGCTTAACAATTGTGTGGGTCACAAAAATTACAGTTCTTTTATTGCTCTCATGGCTTTTAGTCTTGCGTGGCTAGTTATTGAAGCTGGAGTGGGTGTTGCTGTTTTTGTGCGTTTCTTTGTTAACAAGAGAGGAATGGAATCTGAAATCATTGATAGACTCGGAAATGGATTTTCTCGGCCCCCATTTGCAGCCGTTGTGGGCATCACTACCTATGAATATGTTGTAGCAATGAGAGCCATGAGTGAAGCACCTGCAGGAGCATCCGTAGATGAGGATTTGCCAAATATACTTTTCTCTCCAACAGGCTCAGCCACAACTGGATTGAGTGGAGGAAGTTCTCTTGGTTTGCAGTATAAAGGGGCTTGGTGTACCCCTCCTAGGGTATTCGTGGATTATCAGGATGAAGTTGTGCCTCACTTGGAGCCTGGAATGCTACCATCAACTGTTGATCCCGATGCAGCTGGGATTGCAGAAAGAGGGCAAAAGATGCCAAAAAGACCTGTTCGTATTAGTGCTTGGAAGCTTGCTAAGTTGGATTCACAAGAGGCAGTGAGAGCAGCTGCAAAGGCCAGGGCATCTTCTTCAGTTTTGCGACCTGTAGATAACCACCGTCTACCAGATGTAGAATTGAGTTCTAGTGGGAACATGAGCATCAGAAGTAGTTTGAGCACAGAGACTGGAACTAACAAGGAAATAAAAGCCGAGTTGAGATTGTCTCCAGTGAGAAATTCTATTGCTCCTAGTCAAGGAAGTCGTGATGAGTATGAGACTGGAACTCAAAGTATGAGTAGTTTTAGTAGTCCTAGCCATGTTCAAGAGGCAGTTACACTCAGCCCTCTTCCACAGAGTCACAATTTGGGTGGCTTCAGGGCAGGTACCTCAATTCCTAGTTTGGTGCCTGAGCGTCCTTTAACTTGTAAAGCAACATTGTCAAACTTCAGGAACCCGATATCCAATTCTTCTCTTGGATTTGATGGGAGGACAGCAATGCCAAAAGGAATTGGCAATGATCCACTGTTGCTTTCAACTTCTAACACTTCTATTCTAAGAGATGTGAAACGGACATCAGTTGTTTGGGATCAAGAAGCTGGCAGATATGTTTCGGTTCCTTTATTGCCCTCAGAAGCTCGAAATAGGTCATCCATGCGCATAGAATTGCCAAATGTAAATGCCGAAACAAGCAGTATTGGGCGAAAACCAGTGATTCCTCAGCAGGAGTTGTCATCGTCTGCACCCAAGTCTCCAGGCCAGCACAAACAGAATCTGATGTATACAGGAGATTCTATCTTTTATGGAGGTCCATTTTTGAGTGCCGCTGTTAAAGATGGTTTGAGAAATGAAAGACATTTGACATCAACGGATGCCCAAGATGGCAGCATATCAGTGAACTTGCCCCAAGAGCCAAGATATAAAAGGGATTCACTTTCAAATCAGCTTCCTGTGTTTGTCCCTGGTGGATTTGAGAATAACCTTCAACCTCGTTCTGGCATGAATTAA 2139 0.3338 MVRKHGWQLPAHTFQVVAITVFCLLVIAFYAFLAPFIGGGHIWEYTFIAVYSPVALIVFILYVRCTAINPADPGIMSKFDPRVGNKFNSAHNLSGKHLGSEHERVAAREQYSPSSAASKRSMTNISKKSSVEDLDRVDSSRKEINQNSCNAIGGIFCILFSHEDCRKQEATADEQGGGEDALFCTLCNAEVRKFSKHCRSCDKCVDGFDHHCRWLNNCVGHKNYSSFIALMAFSLAWLVIEAGVGVAVFVRFFVNKRGMESEIIDRLGNGFSRPPFAAVVGITTYEYVVAMRAMSEAPAGASVDEDLPNILFSPTGSATTGLSGGSSLGLQYKGAWCTPPRVFVDYQDEVVPHLEPGMLPSTVDPDAAGIAERGQKMPKRPVRISAWKLAKLDSQEAVRAAAKARASSSVLRPVDNHRLPDVELSSSGNMSIRSSLSTETGTNKEIKAELRLSPVRNSIAPSQGSRDEYETGTQSMSSFSSPSHVQEAVTLSPLPQSHNLGGFRAGTSIPSLVPERPLTCKATLSNFRNPISNSSLGFDGRTAMPKGIGNDPLLLSTSNTSILRDVKRTSVVWDQEAGRYVSVPLLPSEARNRSSMRIELPNVNAETSSIGRKPVIPQQELSSSAPKSPGQHKQNLMYTGDSIFYGGPFLSAAVKDGLRNERHLTSTDAQDGSISVNLPQEPRYKRDSLSNQLPVFVPGGFENNLQPRSGMN 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00208 712 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 281 511 - -
Gma12g00208 712 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 9 282 - -
Gma12g00208 712 Pfam DHHC palmitoyltransferase 181 267 IPR001594 GO:0016409
Gma12g00208 712 PANTHER PROTEIN S-ACYLTRANSFERASE 19-RELATED 281 511 - -
Gma12g00208 712 PANTHER PROTEIN S-ACYLTRANSFERASE 19-RELATED 9 282 - -
Gma12g00208 712 ProSiteProfiles DHHC domain profile. 182 232 - -
Gma12g00208 712 MobiDBLite consensus disorder prediction 111 128 - -
Gma12g00208 712 MobiDBLite consensus disorder prediction 109 137 - -
Gma12g00208 712 MobiDBLite consensus disorder prediction 454 474 - -
Gma12g00208 712 MobiDBLite consensus disorder prediction 456 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00208 Gma-Chr12 1632731 1640962 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00208 183 226 Lipid Metabolism Gene Families AT4G22750 45.455 1.44e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00208 K20027 - gmx:100805779 1368.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00208 12 1632731 1640962 Gma11g00883 11 7420128 7427241 GST