Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00203 ATGGGCAGAGTGATGGTGGGAgtggcggtggggctggcggcggtggcgtgtgcggtggcggcggtggcggtggggcAGAGGATGAGGAGCAGAGGGAATTGGAAGAGAGTGGCGAGGGTGTTGAAGGAGGTTGAGGAAGGGTGCGAGACATCGGTTGGGAGGCTGAGGCAGGTGGTGGATGCTATGGCCGTTGAGATGCACGCTGGGTTGGCATCAGAAGGTGGTTCCAAGCTCAAAATGCTTCTCACATATGTTCATAATCTCCCTAATGGGACTGAGAAAGGAACATATTATGCACTAGATCTTGGGGGTACTAATTTTCGGGTTTTGCGGGTTCATTTGCATGGTCAACAATCTTCTGTTTTGGAACATGAAGTAGAGCGACAGCCCATTCCTCAAAATCTAATGACCAGCACAAGTGAGGATCTCTTTGATTTCATTGCTTCTTCATTAAAGGAATTCATTGAGAAAGAAGGAGACGGTTCCAAGCTTTCACCGGACAGAAGAAGGGAACTTGGATTCACATTTTCTTTCCCTGTGAAACAAATGTCTGTTTCCTCTGGCATTTTATTAAAATGGACAAAAGGGTTTTCCATTGTAGATTTGGTAGGAATAGATGTTCCTGCATGTTTGCAGGAAGCATTGACAAGAAAAGGACTAGACGTGCGGGTGGCTGCATTGGTCAATGATACTGTTGGAACATTAGCTCTTGGACATTATCATGACTCAGATACTGTTGCTTCTGTAATAATTGGCACTGGTACCAATGCTTGCTATTTGGAACGGGTTGATGCTATTATCAAGTGTCAAGGTCTTCCTACAACATCAGGATACATGgttgtaaatatggaatggggaaacttttggtcatctcatttaccaagaacatcttatgatattgatttagactctgaaagccctaatccaaatgatcagGGTTTTGAGAAAATGATATCTGGAATGTATCTTGGTGACATCGTGAGGAGAGTCATTCTAAGGATGTCGCTAGAGTCAGATATGCTTGGACCTATTTCTTCCAAACTTTCAATGCCCTTTATGCTGAGGACTCCTATGATGGCTGCCATGCACGAGGATGATTCTCCCGACTTGAGAGAAGTAGCAAGAATCCTTAAAGGCATCCTTGAGATTCCTGATGTTCCTTTAAAGTTAAGAAAAGTTGTGGTGAAGGTGTGTGATGTGGTGACTCGCAGAGCGGCACGATTGGCAGCTGCCGGCATTGTTGGTATCTTGAAGAAGATTGGTAGGGATGGGAGTGGTGGCATCGCAGGTGGGCGAAGAAGTGATATGAAAATGAAAAGAACAGTTGTAGCAATTGAAGGAGGTTTGTATTCTAGCTATACATTGTTTAGGGACTACTTGCATGAAGCTTTGAACGATATATTGGGGGAAGATATTGCCAGGCATGTAATTCTTAAGGTCACTGAAGATGGATCAGGCGTTGGAGCTGCACTGCTTGCTGCCTCGCATTCATCATATGATGTAGATACAGTATAG 1515 0.3967 MGRVMVGVAVGLAAVACAVAAVAVGQRMRSRGNWKRVARVLKEVEEGCETSVGRLRQVVDAMAVEMHAGLASEGGSKLKMLLTYVHNLPNGTEKGTYYALDLGGTNFRVLRVHLHGQQSSVLEHEVERQPIPQNLMTSTSEDLFDFIASSLKEFIEKEGDGSKLSPDRRRELGFTFSFPVKQMSVSSGILLKWTKGFSIVDLVGIDVPACLQEALTRKGLDVRVAALVNDTVGTLALGHYHDSDTVASVIIGTGTNACYLERVDAIIKCQGLPTTSGYMVVNMEWGNFWSSHLPRTSYDIDLDSESPNPNDQGFEKMISGMYLGDIVRRVILRMSLESDMLGPISSKLSMPFMLRTPMMAAMHEDDSPDLREVARILKGILEIPDVPLKLRKVVVKVCDVVTRRAARLAAAGIVGILKKIGRDGSGGIAGGRRSDMKMKRTVVAIEGGLYSSYTLFRDYLHEALNDILGEDIARHVILKVTEDGSGVGAALLAASHSSYDVDTV 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00203 504 PANTHER HEXOKINASE 1 500 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Gma12g00203 504 Gene3D - 83 493 - -
Gma12g00203 504 SUPERFAMILY Actin-like ATPase domain 244 497 IPR043129 -
Gma12g00203 504 Pfam Hexokinase 248 494 IPR022673 GO:0005524|GO:0005975|GO:0016773
Gma12g00203 504 PRINTS Hexokinase family signature 98 114 - -
Gma12g00203 504 PRINTS Hexokinase family signature 172 197 - -
Gma12g00203 504 PRINTS Hexokinase family signature 224 240 - -
Gma12g00203 504 PRINTS Hexokinase family signature 247 261 - -
Gma12g00203 504 PRINTS Hexokinase family signature 312 334 - -
Gma12g00203 504 PRINTS Hexokinase family signature 394 416 - -
Gma12g00203 504 ProSiteProfiles Hexokinase domain profile. 35 494 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Gma12g00203 504 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Gma12g00203 504 ProSitePatterns Hexokinase domain signature. 172 197 IPR019807 GO:0004396|GO:0005524|GO:0006096
Gma12g00203 504 Gene3D - 61 482 - -
Gma12g00203 504 SUPERFAMILY Actin-like ATPase domain 26 242 IPR043129 -
Gma12g00203 504 Pfam Hexokinase 41 240 IPR022672 GO:0005524|GO:0005975|GO:0016773
Gma12g00203 504 PANTHER HEXOKINASE-3 1 500 - -
Gma12g00203 504 CDD NBD_sugar-kinase_HSP70_actin 99 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00203 Gma-Chr12 1589616 1593898 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00203 K00844 - gmx:100790064 910.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00203 12 1589616 1593898 Gma11g00878 11 7365950 7369887 GST