Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00192 ATGTTTTTGGCGAGACCCATTTTCCGAGGACCCTCCCTTTGGGCGTTGCACTCTTCCTATGCATATTCCTCTGCCTCTGCAGCTGCTATTCAAGCTGAGAGAACCATCAAAGAAGGGCCCAGAAACGATTGGAGCCGAGACCAAGTCAAATCCATCTACGACTCTCCCATTCTCGATCTTCTCTTCCACGGGGCTCAAGTTCACAGACATGCTCATAACTTCAGGGAAGTTCAGCAGTGTACTCTTCTGTCTATCAAAACAGGAGGGTGCAGTGAAGATTGTTCCTATTGTCCTCAATCCTCTAAGTATGATACAGGAGTCAAAGGCCAACGCCTTATGAACAAGGAAGCTGTTCTCCAGGCTGCAAAGAAGGCAAAAGAGGCTGGGAGCACTCGCTTTTGTATGGGTGCTGCGTGGAGGGATACACTAGGAAGAAAGACCAACTTCAACCAGATCCTTGAATATGTGAAAGACATAAGGGACATGGGAATGGAGGTTTGTTGCACCCTTGGCATGCTGGAGAAACAGCAGGCTGTTGAACTCAAGAAGGCAGGTCTCACTGCTTATAATCACAATCTTGACACTTCAAGGGAGTATTATCCAAACATAATCACAACAAGGACTTATGATGAGCGTCTTCAAACCCTTGAGTTTGTTCGGGATGCAGGGATCAATGTTTGTTCTGGAGGAATTATAGGGCTTGGAGAAGCAGAGGAGGATCGTGTAGGTTTGTTACATACATTGTCAACACTCCCCACCCATCCAGAGAGTGTTCCTATTAATGCACTTGTTGCTGTAAAGGGAACCCCTCTTGAGGATCAGAAGCCTGTTGAAATATGGGAGATGATTCGCATGATAGCGACTGCACGTATCATAATGCCAAAAGCAATGGTAAGATTATCAGCTGGCAGAGTTCGATTCTCCATGCCTGAGCAGGCATTGTGCTTTCTGGCCGGTGCAAATTCTATATTCACTGGTGAAAAGCTTCTCACTACTCCTAATAATGATTTTGATGCTGATCAACTCATGTTTAAAGTTCTTGGACTCCTCCCAAAAGCTCCAAGCTTAAATGAAGGTGAAACTAATGTGACAGAAGATTATAAGGAAGCAGCTTTTTCTAGTTGA 1125 0.4516 MFLARPIFRGPSLWALHSSYAYSSASAAAIQAERTIKEGPRNDWSRDQVKSIYDSPILDLLFHGAQVHRHAHNFREVQQCTLLSIKTGGCSEDCSYCPQSSKYDTGVKGQRLMNKEAVLQAAKKAKEAGSTRFCMGAAWRDTLGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKQQAVELKKAGLTAYNHNLDTSREYYPNIITTRTYDERLQTLEFVRDAGINVCSGGIIGLGEAEEDRVGLLHTLSTLPTHPESVPINALVAVKGTPLEDQKPVEIWEMIRMIATARIIMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKVLGLLPKAPSLNEGETNVTEDYKEAAFSS 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00192 374 SFLD biotin synthase 37 355 IPR024177 -
Gma12g00192 374 Pfam Radical SAM superfamily 87 245 IPR007197 GO:0003824|GO:0051536
Gma12g00192 374 PANTHER BIOTIN SYNTHASE 19 367 IPR002684 GO:0004076|GO:0009102
Gma12g00192 374 SUPERFAMILY Radical SAM enzymes 42 351 - -
Gma12g00192 374 ProSiteProfiles Radical SAM core domain profile. 75 304 IPR007197 GO:0003824|GO:0051536
Gma12g00192 374 SMART MiaB 80 288 IPR006638 GO:0003824|GO:0051536
Gma12g00192 374 SMART BATS_2 259 351 IPR010722 -
Gma12g00192 374 PIRSF Biotin_synth 24 358 IPR024177 -
Gma12g00192 374 Hamap Biotin synthase [bioB]. 42 352 IPR002684 GO:0004076|GO:0009102
Gma12g00192 374 SFLD BATS domain containing 37 355 - -
Gma12g00192 374 TIGRFAM bioB: biotin synthase 52 349 IPR002684 GO:0004076|GO:0009102
Gma12g00192 374 Gene3D Aldolase class I 41 353 IPR013785 -
Gma12g00192 374 CDD Radical_SAM 87 287 - -
Gma12g00192 374 Pfam Biotin and Thiamin Synthesis associated domain 259 349 IPR010722 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00192 Gma-Chr12 1487363 1491617 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00192 K01012 - gmx:732577 727.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00192 12 1487363 1491617 Gma11g00863 11 7260640 7264860 GST