Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00187 ATGGCTCCAAGCAAGCTCAATTCCTCGGGAAATACTAGTATGCCATGTTCACAGGCTGAGAATGGTTTTGTCAATTCCTTTTCTCTCTTCCCCGAGAAAGTGGTGCAAGAGCTTCTTCAATCTCCAGTCCAGGGGTCGGATGACCATCTTATTGAGTTCTCTGAAGCTTTAAGAACTGTTGCGAAGGCTCTCAGGCTAGTTGCCGAAGGGAAAGCTTCTGCTCAAGCTGAGGCTGCTGAATGGAAACGTAAATATGAGTTGGAGAGGGATCGGAATCTGAAGTTTGAACATGCAGAGAAATCATGTATAGAGCATCAGGCTGAACATGAGGATGTGAGGACAAATAACCCTGCCAAACAACCTGTTTTATGTAATGAAGCTAATGGACAGTCTGAGAAATGTTGTTCAAGGAATGGTATTTGCTCCCATGAAGTTCTTAGGGATGGAACACCTGGTTCTGATTCCAAGATGGTCAAAAAGGCTTCATTTAAACTCTCATGGTTCAGCAAAGGTGATCAAAGTGATCAGTACAAACACGACATTGTCTCTTTTGAAAGGGGAAATATAACCACTGCAGAGCGCAGTAGTAAGCAGATCTCTTTGAAGTGGGAGTCATGCCCACAGACAGTGCTCATATTGACCAAACCAAATTCAGTTTCAGTTCAAATTCTGTGTGCTGAAATGATTAGATGGTTGAGCCAGCAAAAGAATCTACACATCTATGTGGAACCACACGTCAGGGTTGAACTTTTAACAGAATCATCACACTTTAACTTTGTAGAAACTTGGAATGATGATAAGGAACTTTTGAGACTACACACTAAAGTTGACCTCGTGGTAACTCTTGGTGGAGATGGCACTGTCCTATGGGCAGCTTCAATGTTCAAAGGGCCAGTGCCTCCTATTGTCCCCTTTTCTTTAGGGTCTCTTGGCTTTATGACCCCTTTCTATAGCGAACAATACAAAGAATGCCTAGAATCAATCTTAAAGGGCCCCATTAGCATCACATTACGGCATCGTTTGCAATGTCATGTTATACGAGATGCAGCTAAAAATGAATATGAAACTGAAGAACCTATCCTTGTTCTAAATGAGGTTACAATTGACCGTGGAATATCTTCTTTCCTCACAAATTTAGAATGTTACTGTGACAACTCCTTTGTCACGTGTGTGCAAGGGGATGGATTAATCTTATCTACTACATCTGGCAGTACAGCATATTCTTTAGCAGCTGGAGGATCAATGGTCCATCCGCAGGTTCCAGGTATTTTATTCACTCCAATTTGCCCACATTCGCTATCTTTTAGGCCATTGATATTTCCAGAGCATGTGACTTTGAGGGTGCAAGTGCCATTCAACAGCAGAAGCCCTGCATGGGCATCATTTGATGGCAAGGACAGGAAGCAGTTAGCACCTGGAGATGCACTTGTGTGCAGCATGGCTCCATGGCCTGTTCCTACGGCTTGTTTGGATGATTCTACTAATGACTTCTTGCGCAGTATTCATGAGGGCCTCCATTGGAATTTGAGAAAGACACAATCATTTGATGGCCCCCGGGAAACATGA 1566 0.4323 MAPSKLNSSGNTSMPCSQAENGFVNSFSLFPEKVVQELLQSPVQGSDDHLIEFSEALRTVAKALRLVAEGKASAQAEAAEWKRKYELERDRNLKFEHAEKSCIEHQAEHEDVRTNNPAKQPVLCNEANGQSEKCCSRNGICSHEVLRDGTPGSDSKMVKKASFKLSWFSKGDQSDQYKHDIVSFERGNITTAERSSKQISLKWESCPQTVLILTKPNSVSVQILCAEMIRWLSQQKNLHIYVEPHVRVELLTESSHFNFVETWNDDKELLRLHTKVDLVVTLGGDGTVLWAASMFKGPVPPIVPFSLGSLGFMTPFYSEQYKECLESILKGPISITLRHRLQCHVIRDAAKNEYETEEPILVLNEVTIDRGISSFLTNLECYCDNSFVTCVQGDGLILSTTSGSTAYSLAAGGSMVHPQVPGILFTPICPHSLSFRPLIFPEHVTLRVQVPFNSRSPAWASFDGKDRKQLAPGDALVCSMAPWPVPTACLDDSTNDFLRSIHEGLHWNLRKTQSFDGPRET 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00187 521 Coils Coil 71 91 - -
Gma12g00187 521 Gene3D - 197 508 IPR017438 -
Gma12g00187 521 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 209 513 IPR016064 -
Gma12g00187 521 Pfam ATP-NAD kinase N-terminal domain 210 331 IPR002504 GO:0003951|GO:0006741
Gma12g00187 521 Gene3D - 340 483 IPR017437 GO:0003951|GO:0019674
Gma12g00187 521 PANTHER NAD KINASE 1-RELATED 1 521 - -
Gma12g00187 521 Hamap NAD kinase [nadK]. 208 507 IPR002504 GO:0003951|GO:0006741
Gma12g00187 521 Pfam ATP-NAD kinase C-terminal domain 363 480 - -
Gma12g00187 521 PANTHER NAD KINASE 1 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00187 Gma-Chr12 1436258 1443997 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00187 K00858 - gmx:100813625 1054.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00187 12 1436258 1443997 Gma12g00187 12 1436258 1443997 ECH
Gma12g00187 12 1436258 1443997 Gma11g00858 11 7207955 7217180 GST