Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00186 ATGTCGATCGCTTTTTCCTTCTTCACTCCACTCTCTTCCAAATCCCTTCCATCCTTTTCCCTCTCTACCCCTTCTCTCTGTTTTCGCCTCACTCCCCTCCGCCGCCCCACCGATCGCTTTTACCCTCTCCGCTCCTCCGCCGGAGGCCCTGGCGGCGGATCCTTCGGAGGCCACGGCGGTCCCGGACACGGAGGACATGGTGGCGGCGGCGGCGGCGGCGGTCACGACAACGACGACAATGAGAGAAAGAACGAGGCTTTATTGGTGGTGGCGGAGGCGGGGAGGTCGTTGGAGAGCGTGCCGGCGGACCTGGCGGCGGCGATAAAGGACGGCAAGATTCCGGCGTCGGTGGTGAGTCGCTTTCTCGAATTGGAGAAGTCTCCGTTCTTCCGGTGGCTGCTTCAGTTCACTGGGTTCAGGGAGCGTCTTCTCGCTGATGATCTCTTCCTCGCAAAGGTTGCTATGGAATGCGGCGTTGGCGTCTTCACCAAGACTGCTGCTGAGTACGAAAAAAGAAGAGAAAACTTTTTCAATGAGCTCGAAATTGTCTTCGCTGATGTGGCTATGGCCATAATTGCAGATTTCATGTTGGTTTATCTTCCTGCTCCTACCGTAGCGCTTAGACCGCCACTTGCACTCACTGCAGGGCCTATTGCTAAGTTTTTCCATGGCTGCCCGGATAATGCATTTCAGGTTGCACTATCTGGAGCATCATATTCCTTGATACAGAGGGTTGGTGCTATTGTGCGTAATGGGGCTAAGCTTTTTGCAGTTGGAACTGCTTCATCCCTGGTTGGGACAGCTATGACAAATGCCTTCATTAATGCAAAGAAGGCAGTTAACAAGACTTCTGAAGGGGAAATTGAGAATGTTCCCATATTGTCAACCAGTGCTGCTTATGGTGTCTATATGGCAGTTTCTAGCAACCTCAGGTATCAAGTACTTGCTGGAATTATTGAACAGAGGCTTTTGGAACCTTTGCTGCACCAGCACAAACTTATCCTTAGTGCACTTTGTTTTGCTGTGCGGACTGGCAATACATATTTGGGTTCATTATTGTGGGTGGATTATGCTCGTTTTGTAGGGGTTCAATAG 1095 0.5151 MSIAFSFFTPLSSKSLPSFSLSTPSLCFRLTPLRRPTDRFYPLRSSAGGPGGGSFGGHGGPGHGGHGGGGGGGGHDNDDNERKNEALLVVAEAGRSLESVPADLAAAIKDGKIPASVVSRFLELEKSPFFRWLLQFTGFRERLLADDLFLAKVAMECGVGVFTKTAAEYEKRRENFFNELEIVFADVAMAIIADFMLVYLPAPTVALRPPLALTAGPIAKFFHGCPDNAFQVALSGASYSLIQRVGAIVRNGAKLFAVGTASSLVGTAMTNAFINAKKAVNKTSEGEIENVPILSTSAAYGVYMAVSSNLRYQVLAGIIEQRLLEPLLHQHKLILSALCFAVRTGNTYLGSLLWVDYARFVGVQ 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00186 364 Pfam Protein RETICULATA-related 141 318 IPR021825 -
Gma12g00186 364 PANTHER PROTEIN RETICULATA-RELATED 4, CHLOROPLASTIC 21 364 - -
Gma12g00186 364 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 21 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00186 Gma-Chr12 1431541 1435224 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00186 - - gmx:100811998 620.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00186 12 1431541 1435224 Gma12g00186 12 1431541 1435224 ECH
Gma12g00186 12 1431541 1435224 Gma11g00857 11 7201735 7205035 GST