Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00184 ATGGGATGCAAGCGAACACCGTTGAAAAGAAAGTTGAAGAATATGAGCAGCAGTGCAGGGAAGTTGGTGTGTGTCACCGGTGCTGCCGGTTATATTGCTTCATGGATTGTCAAGTTCCTACTTGAACGTGGTTACACTGTCAGGGCCACTGTTCGAAACCCAAATGATCACACGAAGGTAGAACATTTGCTAAAACTTGAAGGTGCAAAGGAGAGACTGCACCTTTTTAAGGCAGATCTTTTGGGTGAAAATTCTTTTGACTCCATTGTTGAGGGCTGTGATGGCGTCTTTCATACTGCTTCTCCTTTTATTATCAACGTCAAAGACCCACAGGCTGACCTACTTGACCCAGCAGTGAAGGGAACTCTTAATGTTCTTAAATCATGTGTAAAATCGCCATCTGTGAAACGAGTCATCTTAACATCTTCTGTGGCTGCAGTTGCATATAATAAAAGGCCTAAAAGTCCTGAAGTTGTAGTTGATGAAACCTGGTGGTCTGATCCAGATTACTGTAGGGAATTAAAGCTGTGGTATTTACTTTCAAAGACTTTGGCTGAAGATGCTGCCTGGAAATTTGCCAAAGAAAACGACCTTGACTTGGTTGTTGTTAACCCAGCAATGGTTGTAGGGCCTCTTTTGCAAGCAGAGCTTAACACTAGTGCTGCTATTATTTTAAACCTAATAAATGGTTCAGAAACTTTTTCAAATGATACATATGGATGGATCAATGTGAAAGATGTTGCAAACGCCCATATTCAGGCATATGAGATTGCTTCAGCTAGTGGAAGATATTGTTTAGTTGAGAGAGTGGCACACTACTCTGAACTCGCCAGGATTTTACGTGATCAGTACCCGACATATCAAATTCCAGAAAAGTCTGCAGACGATAAGCCTTATGTACCAACATTTCAGGTTTCCAAAGAAAAGGCAAAGACCTTGGGGATTGAATTTATTCCTTTGGAAAAAAAGGAGGAACGCAGACCGAGGCGTTTCCAGTTCGAAAGggaaatgaaagtgtctttgttggtgaaggCTTCATGGATCGTCAAATTCCTTCTCCAACGTGGTTACACTGTCAGGGCCACCGTTCGCTACCCAAGTAATCTGAAAAAGGTAGATCACTTGGTTAAACTTGAGGGCGCAAAAGagaggttgcagctgtttaaggcagatctgttggaagaaggttcctttgactctgttgtggaaggctgtcatGGTGTTTTTCATACTGCTTCACCTGTCCGTTTTGTTGTCAACGACCCACAGGCTGAATTGCTTGATCCTGCAGTGAAGGGAACTCTTAATGTTCTCAAATCATGTGCAAAATCACCATCTGTCAAACGGGTTGTTTTAACTTCTTCTATTTCTGCAGTTGCATTTAATCGAAGACCTAAAACTCCTCAAGTGGTAGTTGATGAGACATGGTTTTCAGATCCAGATGTCTGTAGGGAATTAGAGTTGTGGTACACACTTTCAAAGACTTTGGCTGAGGATGCTGCCTGGAAATTTGTAAATGAAAACAGCATTGACATGATTTCTATTAACCCAACTATGGTGGCAGGACCTCTCTTACAACCAGAGATTAATGAAAGTGTTGAGCCAATTTTAAACCTAATAAATGGTAAACCATTTCCAAATAAATCTTTTGGATGGGTCGATGTGAAAGATGTTGCTAATGCTCATATTCTGGCCTATGAAATTGCTTCAGCTAGTGGAAGATATTGTTTGGTTGAGAGAGTCATACACTACTCTGAACTTGCTACGATTTTACGTGGTCTGTACCCCACATTACAAATTCCAGATAAGTGTGAGGTAGATGAGCCGTATATCCCAACATACCAGATTTCCACAGAAAAGGCAAAAAAGGACTTGGGAATAGAGTTTACTCCTTTGGAAGTGAGTCTCAGGGAGACTGTGGAAAGCTTTAGAGAAAAGAAGATTGTCAACTTTAATCCGTGA 1962 0.3914 MGCKRTPLKRKLKNMSSSAGKLVCVTGAAGYIASWIVKFLLERGYTVRATVRNPNDHTKVEHLLKLEGAKERLHLFKADLLGENSFDSIVEGCDGVFHTASPFIINVKDPQADLLDPAVKGTLNVLKSCVKSPSVKRVILTSSVAAVAYNKRPKSPEVVVDETWWSDPDYCRELKLWYLLSKTLAEDAAWKFAKENDLDLVVVNPAMVVGPLLQAELNTSAAIILNLINGSETFSNDTYGWINVKDVANAHIQAYEIASASGRYCLVERVAHYSELARILRDQYPTYQIPEKSADDKPYVPTFQVSKEKAKTLGIEFIPLEKKEERRPRRFQFEREMKVSLLVKASWIVKFLLQRGYTVRATVRYPSNLKKVDHLVKLEGAKERLQLFKADLLEEGSFDSVVEGCHGVFHTASPVRFVVNDPQAELLDPAVKGTLNVLKSCAKSPSVKRVVLTSSISAVAFNRRPKTPQVVVDETWFSDPDVCRELELWYTLSKTLAEDAAWKFVNENSIDMISINPTMVAGPLLQPEINESVEPILNLINGKPFPNKSFGWVDVKDVANAHILAYEIASASGRYCLVERVIHYSELATILRGLYPTLQIPDKCEVDEPYIPTYQISTEKAKKDLGIEFTPLEVSLRETVESFREKKIVNFNP 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00184 653 CDD FR_SDR_e 23 314 - -
Gma12g00184 653 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 14 322 IPR036291 -
Gma12g00184 653 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 345 650 - -
Gma12g00184 653 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 16 322 - -
Gma12g00184 653 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 345 650 - -
Gma12g00184 653 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 16 322 - -
Gma12g00184 653 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 346 645 IPR036291 -
Gma12g00184 653 Pfam NAD dependent epimerase/dehydratase family 23 256 IPR001509 -
Gma12g00184 653 Pfam NAD dependent epimerase/dehydratase family 346 567 IPR001509 -
Gma12g00184 653 CDD FR_SDR_e 345 626 - -
Gma12g00184 653 Gene3D - 21 331 - -
Gma12g00184 653 Gene3D - 344 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00184 Gma-Chr12 1403859 1413224 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00184 345 651 Miscellaneous Gene Families AT5G19440 66.234 1.52e-150 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00184 - - egr:104433852 840.876