Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00177 atgatggattgcggtgttggatccatcgtgtgggtgcgtcggagaaacgggtcgtggtggccgggtcaaatcctcggccccgacgacctctccgcctctcacctcacctcgccccgatccggaacccccgtcaagctcctcggcagagaagacgccagcgtggattggtacaatttggagaaatccaagcgtgtgaaggcattccggtgtggcgagtttgatgattgtattgaaaaggctgaaaccgctcagggagggccgttgaagaaacgagagaagtatgcgcgccgagaagacgccattctccatgctcttgagcttgagaaacagatttcgaagaagccagggaaatcaagtgctagttcATTGAATGCTGTTAAAAAGGTTGCGGTTGCGGTTGCATCGCCGCCCGAAACACTGGGAAATGATAATGAAAACCATGCAAATTTGAATGTGTATTGTGAAAATGAGACTGGTGGAGGTTCCTTTCCTTCCGAGGTTGCCAAGGATGGCAATCAACTGCATGTGGAAGTAGATTATTCTGAAACGACTCCTCGGATGAGAGACTTGCAGGATTTTGGGCTCAGAATCGCCCCTGCGAAAAAGAATCtttcatcttctgttgatccatacttttctcagaagcggattgttgatgatggtgctcgggctcttgcaagtggtggtggtattcgtacggggagtgcacttctcatgaatggagctgggcaaatagcagattcccgagcaaagaggagtagatatgtgcactttccgactgagtctagtgattctcttgaatacagagagactctaccctgtgttgagatgtcaccttcccaactcagaagggagtttccttatcatgattctttggttcgagaggctgaatatacttttatggatgatgctgaatctgattcttcagaaacagcctctacagattctgattctgattcttccgagacagaaccagacatggatgaagagatgactatattttcagAAACTGGTCATGATGCTGAAGAACACGAAAGTACTAGCAGTGAGGAGCTTGATGAATTGCCAATTTCCAATGACATGTCTCACCTTTATCCTCGTGACTTAATAACATGTAATGATGCTGTATCTAAATGGCAACTTAAAGGGAAAAGGAATAATCGGAATCTTGTAAAGAGGTCCGTTGGTGCTTCTGAAGGAAAATGTATTTTGGATGGAGCAGGAGCAGATGTTGAAGGAAGGAATGGTCATTTAAGGCACAATAGAAAGGGTCCAAGTTTGCACCGCTACAAATTTGATTTTGGTGATACTTTTGATGACGATGGTCAGATTTTTGGACTGGAAGATGAATACTCTCTAACTTCTAGATCTATATCAAAAAGTGGAAGTAAAATTCATCGTGGTGTAGCTTGGAATGATTTGGCCTGGGGTGACCATCTTGCTTCAAAAGGATATTGGGATGTTAAAGCATATTCTCCAATGCATGGTGATCGTTATGATTTTGGTGGGAGGGTGAGGTCGATGCTGGTTGATGTAGATTTGAAGGTTCAAGCAAGCTATAGGAAAGAGCATGTACCTTTCATTTCTCTGATGAGTAAATTAGATGGGAGGGCAATAGTAGGGCACCCAATTCAGGTTGAGGCTCTCAAGGATGGTTCATCTGATATTCTATTTCCTGCAACTGATGACTTCAGTAATGATGGGACTGCTATTGAGGGAACTAGCGTGCTTCCACCAGCATGGAGGACTGCAAGGAGAACTGCAAATTTTCGTGTGCGACGCCCCCATGTTCCATCTTCAAATGGTGTTGAAGTTGCTGCAGAGCTTCCCTCTTCAGATCAAGAACAAAACTTCGAATTTAGAAGTTTAAACTCTGGAAGTTCCAGTCACCAGGCTAGCCTTCAAAAGAAGAGTGGCCTTAAAAGTCATCGGTCTTCAGCTGACAGAAAGTCCTTAAAAAAGGTGCCAAAGAAATTGGGCTTGTCATCTAGCCAAAAAACTCGAACTCTGTCCTCATTATCTACTGAACATAATCTTAGTAGAAAGCCATTACATGATAGCAGTAGTTATCAAACAGATAGATTGACTAAACCAGAAATCTCTAGGCCCACTACAGTAGCTTGCATACCAGTCCAGCCTTGGCAGCCGAGATCTGAATTCAGTTCTGTCAGAAAAGGAGATCGAACAATGTCTGAATACAAACACTTTGACGTCATCACCCTGCAGCATGGCGACTGGCCTTTGGATTTGGCAAAAGAGGAATCAAAGCTGGAGGAGATAAAGAACTATTCCATCTAG 2298 0.2837 MMDCGVGSIVWVRRRNGSWWPGQILGPDDLSASHLTSPRSGTPVKLLGREDASVDWYNLEKSKRVKAFRCGEFDDCIEKAETAQGGPLKKREKYARREDAILHALELEKQISKKPGKSSASSLNAVKKVAVAVASPPETLGNDNENHANLNVYCENETGGGSFPSEVAKDGNQLHVEVDYSETTPRMRDLQDFGLRIAPAKKNLSSSVDPYFSQKRIVDDGARALASGGGIRTGSALLMNGAGQIADSRAKRSRYVHFPTESSDSLEYRETLPCVEMSPSQLRREFPYHDSLVREAEYTFMDDAESDSSETASTDSDSDSSETEPDMDEEMTIFSETGHDAEEHESTSSEELDELPISNDMSHLYPRDLITCNDAVSKWQLKGKRNNRNLVKRSVGASEGKCILDGAGADVEGRNGHLRHNRKGPSLHRYKFDFGDTFDDDGQIFGLEDEYSLTSRSISKSGSKIHRGVAWNDLAWGDHLASKGYWDVKAYSPMHGDRYDFGGRVRSMLVDVDLKVQASYRKEHVPFISLMSKLDGRAIVGHPIQVEALKDGSSDILFPATDDFSNDGTAIEGTSVLPPAWRTARRTANFRVRRPHVPSSNGVEVAAELPSSDQEQNFEFRSLNSGSSSHQASLQKKSGLKSHRSSADRKSLKKVPKKLGLSSSQKTRTLSSLSTEHNLSRKPLHDSSSYQTDRLTKPEISRPTTVACIPVQPWQPRSEFSSVRKGDRTMSEYKHFDVITLQHGDWPLDLAKEESKLEEIKNYSI 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00177 765 MobiDBLite consensus disorder prediction 658 699 - -
Gma12g00177 765 ProSiteProfiles PWWP domain profile. 6 61 IPR000313 -
Gma12g00177 765 MobiDBLite consensus disorder prediction 302 327 - -
Gma12g00177 765 PANTHER PWWP DOMAIN-CONTAINING PROTEIN-RELATED 2 179 - -
Gma12g00177 765 PANTHER PWWP DOMAIN-CONTAINING PROTEIN-RELATED 241 712 - -
Gma12g00177 765 SUPERFAMILY Tudor/PWWP/MBT 5 109 - -
Gma12g00177 765 MobiDBLite consensus disorder prediction 592 702 - -
Gma12g00177 765 MobiDBLite consensus disorder prediction 300 327 - -
Gma12g00177 765 PANTHER T17B22.17 PROTEIN-RELATED 2 179 IPR044679 -
Gma12g00177 765 PANTHER T17B22.17 PROTEIN-RELATED 241 712 IPR044679 -
Gma12g00177 765 Gene3D - 2 117 - -
Gma12g00177 765 MobiDBLite consensus disorder prediction 605 640 - -
Gma12g00177 765 Pfam PWWP domain 7 87 IPR000313 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00177 Gma-Chr12 1351397 1356830 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00177 - - gmx:102669790 1367.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00177 12 1351397 1356830 Gma11g00849 11 7141995 7145399 GST