Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00161 ATGGCGGTATCGGTGAAAGTCAGCAACATCTCTTCAACTGCAACCGAGCAAGATTTGAGGGAATTTCTTGCGTTTCCGGGAAAAATCGAATATATTGAAATGCAAAGTGATAAGGGAAATTCCCAAGTTGCGTATGTTACCTTCAGTAATCCAGAGGGGGCAGAAACTGCAGTTCTTCTCTCGGGGGCGGTGGTGTGTGGACAGTCTCTAACCATAGCTTTGGCTCCGGATCATGCTCTGCCTGCCTCTGCTGCATCTGCAACACAGACTAGTAATGCTGAGAGTGGTGAATCTGGTTTGAGAAAGGCAGAGGATGTTGTAACCGGCTTGCTAGCAAAGGGCTTCATTTTGGGTAAAGATGCATTGAATCGAGCAAAATCCTTTGATGAAAGGCACCAGCTAACTTCCACGGCAACAGCAAAAGTTGTTTCTTTGGACCAGAAGGTTGGTTTCACTGAAAAGATCAGTGCCGGTACGGTTATAGTGAATGACAAAATGAAAGAAATGGATGAGAAATTTCAAGTGTCGGAGAAGACTAAATCTGCAATTTCAGTAGCTGAGCAGTCAGTGTCTAGTGCTGGATCTGCCATAATGAAGAATCGTTATGTGTTGACTGGGGCTACATGGGTAACGGGTGCTTACAGCAGGGTTGCTAAGGCAGCTGAGGAGGTGGGACAGAAAACTAAGGAGAAGGTTTTGGCCCAGGACAATCAAGGAAAAACTGAAGAAGGTGCTCATGTCCACACATCCATTTCTGAACCTAATCAACCATCCAAAACTGAACCTCAACAGGCAACCACAGCTAATCAGCCTTCCAAACCTGAACAACAGGCCACCAAGGATGGTCAACCTTCCAATTCTGCAACAACTAAGGATTGA 879 0.4573 MAVSVKVSNISSTATEQDLREFLAFPGKIEYIEMQSDKGNSQVAYVTFSNPEGAETAVLLSGAVVCGQSLTIALAPDHALPASAASATQTSNAESGESGLRKAEDVVTGLLAKGFILGKDALNRAKSFDERHQLTSTATAKVVSLDQKVGFTEKISAGTVIVNDKMKEMDEKFQVSEKTKSAISVAEQSVSSAGSAIMKNRYVLTGATWVTGAYSRVAKAAEEVGQKTKEKVLAQDNQGKTEEGAHVHTSISEPNQPSKTEPQQATTANQPSKPEQQATKDGQPSNSATTKD 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00161 292 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 6 70 IPR000504 GO:0003723
Gma12g00161 292 MobiDBLite consensus disorder prediction 223 292 - -
Gma12g00161 292 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 3 258 - -
Gma12g00161 292 SUPERFAMILY RNA-binding domain, RBD 4 77 IPR035979 GO:0003676
Gma12g00161 292 MobiDBLite consensus disorder prediction 223 247 - -
Gma12g00161 292 MobiDBLite consensus disorder prediction 248 292 - -
Gma12g00161 292 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 3 77 IPR000504 GO:0003723
Gma12g00161 292 PANTHER BINDING PARTNER OF ACD11 1 3 258 - -
Gma12g00161 292 Gene3D - 2 80 IPR012677 -
Gma12g00161 292 SMART rrm1_1 4 73 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00161 Gma-Chr12 1234203 1236782 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00161 - - gmx:100784398 533.102