Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00149 ATGATCCATTGTAAGAAAAGAAGGATAGAAGAAAGTGAGCAATTTTCGGCAATTACTTCAACTCGCCACTTGGAAGAAACCTCACCAAACATTGCCTCCAAGATGAATTTTAACAATGTGAATGTCCCAAAGGTTCCTGGTGGCGGAGTCGCTGCTTTGCTTAAAGTTAGCATTATTGGTGGGCTTGTTGTTTATGGGGCTGCAAACAGCTTGTACAATGTTGAGGGAGGTCATCGAGCCATTGTCTTCAATCGTGTTGTCGGTGTCAAGGATAAGGTTTATCCTGAAGGGACACATATTATGATTCCTTTGTTCGAGAGGCCTGTGATCTACGACGTACGTGCACGACCTCATTTAGTAGAGAGTACATCAGGGAGCCGTGATCTCCAAATGGTGAAAATTGGACTCAGAGTCCTTACGCGCCCTGTTCCTGACCAGTTACCGACAGTTTATCGAACCCTGGGTGAGAATTATAATGAAAGGGTCCTGCCTTCTATTATACACGAAACTCTCAAAGCTGTAGTTGCACAGTATAATGCCAGCCAGCTCATTACTCAGAGAGAGAATGTTAGTCGAGAAATAAGGAAGATATTGACTCAGAGGGCGTCCCAATTTAACATTGCTTTGGATGATGTGTCAATCACAAGTTTGACGTTTGGGAAGGAATTTACAGCAGCTATTGAAGCCAAGCAGGTTGCTGCTCAAGAAGCTGAGAGAGCTAAATTTGTTGTAGAAAAAGCTGAACAAGACAAACAAAGTGCTGTTATTAGAGCTCAGGGTGAAGCTAAGAGTGCCCAGTTGATTGGTCAAGCTATTGCCAATAATCCTGCGTTTATCACCTTAAGGAAAATTGAAGCTGCAAGGGAAATCGCTCAGACGATTTCAAATTCTGCCAACAAGGTTTACTTGAATTCAAATGATCTCTTGCTGAATCTTCAGGAGTTAAATTTGGAGCCCAGTGGGAAGAGATAG 972 0.429 MIHCKKRRIEESEQFSAITSTRHLEETSPNIASKMNFNNVNVPKVPGGGVAALLKVSIIGGLVVYGAANSLYNVEGGHRAIVFNRVVGVKDKVYPEGTHIMIPLFERPVIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPVPDQLPTVYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSREIRKILTQRASQFNIALDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFVVEKAEQDKQSAVIRAQGEAKSAQLIGQAIANNPAFITLRKIEAAREIAQTISNSANKVYLNSNDLLLNLQELNLEPSGKR 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00149 323 PRINTS Prohibitin signature 201 220 IPR000163 GO:0016020
Gma12g00149 323 PRINTS Prohibitin signature 249 265 IPR000163 GO:0016020
Gma12g00149 323 PRINTS Prohibitin signature 114 130 IPR000163 GO:0016020
Gma12g00149 323 PRINTS Prohibitin signature 132 151 IPR000163 GO:0016020
Gma12g00149 323 PRINTS Prohibitin signature 178 194 IPR000163 GO:0016020
Gma12g00149 323 PRINTS Prohibitin signature 226 249 IPR000163 GO:0016020
Gma12g00149 323 PRINTS Prohibitin signature 155 173 IPR000163 GO:0016020
Gma12g00149 323 SUPERFAMILY Band 7/SPFH domain 102 238 IPR036013 -
Gma12g00149 323 Coils Coil 230 250 - -
Gma12g00149 323 CDD SPFH_prohibitin 71 265 IPR000163 GO:0016020
Gma12g00149 323 Gene3D Band 7 domain 99 233 IPR036013 -
Gma12g00149 323 PANTHER PROHIBITIN-1, MITOCHONDRIAL-LIKE 35 320 - -
Gma12g00149 323 Pfam SPFH domain / Band 7 family 73 252 IPR001107 -
Gma12g00149 323 PANTHER PROHIBITIN 35 320 IPR000163 GO:0016020
Gma12g00149 323 SMART PHB_4 70 231 IPR001107 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00149 Gma-Chr12 1142094 1145607 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00149 K17081 - gmx:100804529 521.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00149 12 1142094 1145607 Gma11g00997 11 8466412 8470263 GST