Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00116 ATGGCGCTTAAAACCCTATCCACTTTCCTCTCACCTCTTTCTCTTCCCAACACCAAATTCCCGCAATTCCTCACCACCAAGCCTTCCCTCATTCTCTGCGAGTTCCCTCGCTCTCAGAAATCGCGTTTGCTCGCCGCCGATTCGGAAGGCACCGGCGCCGCCGCTCCTTCTCCCGGCGAGAAGTTCCTCGAACGCCAGCAGTCCTTCGAAGATGCTAAGATCATTCTCAAAGAAAACAAGAAGAAGAGAAAGAAGAAAGACAATGCTATAAAAGCTTCTAGAGCCGTCGCTTCTTGCTACGGCTGCGGCGCTCCGTTACACACTTCCGATGCCGATGCCCCTGGCTACGTTGATCCCGAAACCTATGAATTGAAGAAGAAACACCACCAGCTTCGAACCGTTCTGTGTAGGCGGTGCCGGCTTTTGTCTCATGGCAAGATGATAACTGCCGTTGGAGGGCACGGAGGATATCCTGGCGGTAAATTATTCGTCACTGCTGAAGAGCTTCGAGAAAAGTTGTCTCACCTGCGTCACGAGAAAGCTCTAATCGTCAAATTGGTTGATATTGTTGACTTCAATGGCAGTTTTTTGTCTCGTGTGCGAGATCTTGCTGGTTCTAATCCAATAATATTAGTGGTGACTAAGGTTGATCTCCTTCCTAGAGATACTGATCTTCATTGTGTTGGGGATTGGGTTGTAGAGGCTACTATGAGAAAGAAGCTAAATGTTCTCAGTGTCCATCTGACCAGTTCCAAATCATTGGTTGGAATAACTGGAGTGATATCGGAAATCCAGAAAGAGAAGAAGGTTCTTTTCTCTGGTTCAGCTAATGTTGGGAAATCTGCTTTCATCAATGCTTTACTAAAAACAATGGCTATAAATGATCCAGTGGCTGCATCTGCACAAAGATACAAACCAATACAATCTGCAGTTCCTGGAACTACCTTAGGGCCAATTCAAATTAATGCTTTCCTAGGAGGAGGGAAATTGTACGACACTCCTGGAGTTCATCTCTACCATAGGCAAACTGCAGTTGTTCATTCTGAAGATCTACCCATCCTTGCTCCACAAAGCCGACTGAGGGGCCTGTCTTTCCCAAGTTCTATAGTATCTTCAGTAGAGGAAGGAGCTTCCACCATAGTGAATGGCTTGAATGCATTTTCAATATTTTGGGGAGGTCTTGTTAGAATTGATGTCTTGAAGGTTCTCCCAGAAACTTGTTTGACATTTTATGGACCCAAGAGAATACCAATTCATATGGTACCCACAGAGCAAGCAGTTGAATTTTATCAGACAGAACTTGGAGTTCTGCTGACCCCACCAAGTGGAGGAGAAAATGCTGAGAACTGGAAAGGACTTGAATCAGAACGTAAATTGCAAATTAAATTTGAAGATGTGGACAGACCAGCTTGTGATATAGCTATATCAGGTCTAGGATGGTTTACTGTTGAGCCAGTTAGTCGGTCACTCAAAATCTCACAACCAAAACCGGTAGAGACTGCTGGGGAATTGATTTTGGCTGTGCACGTCCCCAAGGCTGTTGAGATTTTTGTGAGGTCACCAATACCAGTAGGCAAGGCTGGAGCAGAGTGGTACCAGTATGTAGAATTAACAGAGAAACAAGAGGAAATGAGACCAAAATGGGAAGTTGATGGCTGA 1659 0.4527 MALKTLSTFLSPLSLPNTKFPQFLTTKPSLILCEFPRSQKSRLLAADSEGTGAAAPSPGEKFLERQQSFEDAKIILKENKKKRKKKDNAIKASRAVASCYGCGAPLHTSDADAPGYVDPETYELKKKHHQLRTVLCRRCRLLSHGKMITAVGGHGGYPGGKLFVTAEELREKLSHLRHEKALIVKLVDIVDFNGSFLSRVRDLAGSNPIILVVTKVDLLPRDTDLHCVGDWVVEATMRKKLNVLSVHLTSSKSLVGITGVISEIQKEKKVLFSGSANVGKSAFINALLKTMAINDPVAASAQRYKPIQSAVPGTTLGPIQINAFLGGGKLYDTPGVHLYHRQTAVVHSEDLPILAPQSRLRGLSFPSSIVSSVEEGASTIVNGLNAFSIFWGGLVRIDVLKVLPETCLTFYGPKRIPIHMVPTEQAVEFYQTELGVLLTPPSGGENAENWKGLESERKLQIKFEDVDRPACDIAISGLGWFTVEPVSRSLKISQPKPVETAGELILAVHVPKAVEIFVRSPIPVGKAGAEWYQYVELTEKQEEMRPKWEVDG 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00116 552 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 340 IPR027417 -
Gma12g00116 552 Pfam 50S ribosome-binding GTPase 269 337 IPR006073 GO:0005525
Gma12g00116 552 CDD YqeH 136 336 - -
Gma12g00116 552 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 166 339 IPR030378 GO:0005525
Gma12g00116 552 PANTHER NO-ASSOCIATED PROTEIN 1, CHLOROPLASTIC/MITOCHONDRIAL 37 549 IPR044229 GO:0003924
Gma12g00116 552 Gene3D - 167 340 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00116 Gma-Chr12 906510 915826 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00116 K13427 - gmx:100781340 1032.71