Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00086 ATGAATTTGGCAAAGGGTGTTGGCGGAAACATTGACAAATCCCAAGTTCTGTCCGCTGTTGAAAAGTACGAGAAGTATCATGCTTCTTATGGAGGTCAGGAGGAGGAGAGGAAAGCTAATTATGTTGATATGGTTAATAAATTCTATGATCTTGCTACTAGCTTTTATGAGTATGGCTGGGGGCAATCTTTCCATTTTGCACCTAGATGGAAAGGGGAATCTGTTCGAGAAGGCATTAAAAGACACGAGCACTTCATTGCTTTACAACTTTGCCTAAAGCCTGGACAAAAGGTTTTGGATGTTGGATGTGGAATTGGGGGACCACTTAGAGAAATATCCCGATTCAGCTCAACATCAATAACAGGATTGAACAATAATGAGTATCAGATAACAAGAGCAAAGGAACTTAACCGTAATACTGGAGTGGACAAGACTTGCAATTTTGTCAAGGCTGACTTTATGAAGATGCCTTTCCCGGACAATAATTTTGATGCAGTATATGCAATTGAAGCCACCTGTCATGCACCAGATGTTTATGCATGctacaaagagatctttagagtgttaaagcctggccaactttttgcggcatatgaatggtgcatgactgaagctttcgatcccaacaatgAAGAACACCAAAAGATAAAGGAAGAAATTGAGGTTGGTGATGGACTTCCTGACATTAGATTGACCACAAAGTGTGTTGAAGCTCTAAAGCAAGCAGGTTTTGAGGTAATCTGGGAGAAAGATCTTGCAGTTAATTCTCCAGTTCCTTGGTACTTTCATTTGGATGCAAGTCACTTCTCACTTAGTACCTTTCCTCTAACATCTATTGGACGATTTTTCACAAGAAGTCTGATAAGGGCTTTAGAATTTGTTCGACTAGCTCCAAGGGGAAGTCTAAAAGTTCAAGAAATCTTACAAAGGGCAGCAGATGGACTACTTGAAGGTGGAAAGAAAGAGATTTTCACACCAATGTACTTCTTTTTGGCTCGAAAGCCTAATTTTGGTGGTCAATAA 1023 0.3646 MNLAKGVGGNIDKSQVLSAVEKYEKYHASYGGQEEERKANYVDMVNKFYDLATSFYEYGWGQSFHFAPRWKGESVREGIKRHEHFIALQLCLKPGQKVLDVGCGIGGPLREISRFSSTSITGLNNNEYQITRAKELNRNTGVDKTCNFVKADFMKMPFPDNNFDAVYAIEATCHAPDVYACYKEIFRVLKPGQLFAAYEWCMTEAFDPNNEEHQKIKEEIEVGDGLPDIRLTTKCVEALKQAGFEVIWEKDLAVNSPVPWYFHLDASHFSLSTFPLTSIGRFFTRSLIRALEFVRLAPRGSLKVQEILQRAADGLLEGGKKEIFTPMYFFLARKPNFGGQ 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00086 340 Pfam Methyltransferase domain 99 195 IPR013216 GO:0008168
Gma12g00086 340 Pfam Sterol methyltransferase C-terminal 272 335 IPR013705 GO:0006694|GO:0008168
Gma12g00086 340 PANTHER ZGC:194242 2 336 - -
Gma12g00086 340 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 39 335 IPR029063 -
Gma12g00086 340 Gene3D Vaccinia Virus protein VP39 18 269 IPR029063 -
Gma12g00086 340 ProSiteProfiles SAM-dependent methyltransferase Erg6/SMT-type domain profile. 48 335 IPR030384 GO:0008168
Gma12g00086 340 CDD AdoMet_MTases 97 201 - -
Gma12g00086 340 PANTHER METHYLTRANSFERASE 2 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00086 Gma-Chr12 670111 675804 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00086 78 251 Acyl Lipid Metabolism Gene Families AT1G48600 32.759 2.50e-17 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00086 K00559 - gmx:100817534 703.745