Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00072 ATGGGTGTTGTGGAGGGTCTCTTGGCATTGGGTTTGATTCTGAATGTGTGTGTTGTGTGCAATGGAGGCACAAGCAGCCCCTTCGTCAGGAAAGTTGAGAAGGCTGTAGATATGCCACTTGACAGCGATGTCTTTGCTATTCCTCCTGGTTATAATGCCCCCCAGCAGGTTCATATAACGCAAGGTGACCTAGTGGGGAAAGCAGTGATCGTGTCATGGGTGACTGTGGATGAGCCGGGGTCGAGCGAAGTGCGTTACTGGAGTGAGAACAGTGACCAGAAGAAGATAGTTGAAGGAAAACTTGTTACTTATAGGTTCTTCAATTACACATCTGGTTTTATTCATCACACCACCATCAGAAATTTGGAGTACAACACCAAATACTACTATGAGGTTGGACTTGGGAACACAACACGGCAGTTTTGGTTTGTGACTCCTCCTGAAATCGGTCCCGATGTGCCATATACATTTGGTCTCATAGGGGATCTTGGTCAGAGTTTTGATTCAAATAAAACTCTTTCTCACTATGAATTGAACCCAAGAAAAGGACAAACTGTACTATTCGTTGGAGACCTCTCTTATGCGGATAACTACCCAAATCATGATAACATTAGGTGGGATTCTTGGGGAAGGTTTACAGAAAGGAGTGTTGCTTATCAACCATGGATATGGACTGCAGGAAACCATGAAATTGATTTTGCTCCAGAAATTGGTGAAACTGTACCTTTCAAGCCTTATACCCACCGTTACCATGTTCCTTATAAAGCATCTCAAAGTACTTCACCCTTCTGGTATTCTATCAAGAGAGCTTCAGCACACATCATTGTTTTGGCCTCATATTCAGCGTATGGAAAATATACACCACAATATAAATGGCTTGAAAAGGAGCTACCGAAAGTTAACAGGACAGAGACTCCTTGGTTGATTGTTCTCATGCATTCACCTTGGTATAATAGCTACAATTATCACTATATGGAAGGGGAAACAATGAGAGTCATGTATGAGCCCTGGTTTGTGCAGTACAAGGTTGATGTTGTGTTTGCTGGTCATGTTCATGCCTATGAACGATCTGAGCGTGTTTCCAATGTTGCATACAATATTGTAAATGGTCTTTGTGCTCCTGTAAATGATAAATCAGCTCCTGTATATATAACCATTGGGGATGGAGGAAACCTTGAAGGTTTAGCAACCAACATGACAGAACCACAGCCAAAGTATTCTGCATTCCGAGAGGCCAGCTTTGGACATGCCATTTTTGACATAACGAACCGAACTCATGCTCACTATAGCTGGCACCGAAATCAAGATGGAGTTGCTGTGGAGGCCGATTCCCTTTGGTTTTTCAACAGATACTGGCACCCAGTTGATGATTCCACTGCTCATGTTTCACATTAA 1395 0.4294 MGVVEGLLALGLILNVCVVCNGGTSSPFVRKVEKAVDMPLDSDVFAIPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEPGSSEVRYWSENSDQKKIVEGKLVTYRFFNYTSGFIHHTTIRNLEYNTKYYYEVGLGNTTRQFWFVTPPEIGPDVPYTFGLIGDLGQSFDSNKTLSHYELNPRKGQTVLFVGDLSYADNYPNHDNIRWDSWGRFTERSVAYQPWIWTAGNHEIDFAPEIGETVPFKPYTHRYHVPYKASQSTSPFWYSIKRASAHIIVLASYSAYGKYTPQYKWLEKELPKVNRTETPWLIVLMHSPWYNSYNYHYMEGETMRVMYEPWFVQYKVDVVFAGHVHAYERSERVSNVAYNIVNGLCAPVNDKSAPVYITIGDGGNLEGLATNMTEPQPKYSAFREASFGHAIFDITNRTHAHYSWHRNQDGVAVEADSLWFFNRYWHPVDDSTAHVSH 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00072 464 Pfam Purple acid Phosphatase, N-terminal domain 54 145 IPR015914 GO:0003993|GO:0046872
Gma12g00072 464 SUPERFAMILY Purple acid phosphatase, N-terminal domain 36 147 IPR008963 GO:0003993|GO:0046872
Gma12g00072 464 CDD MPP_PAPs 151 449 IPR041792 -
Gma12g00072 464 Gene3D - 53 149 - -
Gma12g00072 464 PANTHER ACID PHOSPHATASE RELATED 8 461 IPR039331 GO:0003993
Gma12g00072 464 PANTHER PURPLE ACID PHOSPHATASE 8 461 - -
Gma12g00072 464 Pfam Calcineurin-like phosphoesterase 156 354 IPR004843 GO:0016787
Gma12g00072 464 Pfam Iron/zinc purple acid phosphatase-like protein C 380 438 IPR025733 -
Gma12g00072 464 SUPERFAMILY Metallo-dependent phosphatases 151 458 IPR029052 -
Gma12g00072 464 Gene3D - 150 459 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00072 Gma-Chr12 553258 557181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00072 112 437 Miscellaneous Gene Families AT1G13900 26.121 1.15e-20 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00072 K22390 - gmx:100807555 988.408