Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00063 atgtcgcattCTAAGCTAAGCAAAGCTAAGCTAGTTGCCATGTCGAAGGATAAAGACGCTACCAATCTTTCACGCACCTTCAAGTACCTATTAGCTACTCAGTTCTTATCAAGAGGAATTCCATTCATATTCAATACATGGATTGTAAGGCATCTTACACAAGAGGACTATGCGCTGTATGCAGTGCAGTTTCATCTGTTAGTCACATGTATTTTATTTCTTAGCCGGGAGGGCTTTCGACGAGCATGCTTGCGGATGGACCTCAAATGTGATGGCACTTCAATGGGAGATGTTGTGAAGCTAATGAAAGTAGTGTGGATGAGTTTTCCACTTGGAATATTTATTACAGTTGTAGTATGCCTTTTTGTCTTCTGGTGGCAACAAATAAGTTATTCTAGTCCACATGGGCAAGCTATCTTGATCAATGGTTTTGCATGCATTTTGGAGCTCCTGGCTGAGCCGGTGTATATTCTTTCACAGAACTTGGTCTTGCTTGAATTACGGCTGATGGTTGAGACTGTTGCTACTCTGTCGTGGTGCTTGACAATGTATTTTCTAATTGTGAAGCAAACTGGAATTGAAAAATCAATCATATTTGCATTGTCACAGTCTGCATATGGAGCTTGCTTATTTCTTGGTTATTGGGGCTATCTTTTGCTTTCCCAAAAATTTAGGGTTTCTTACCTTTTTCCATTCAGagaaggaaaagtgattgattttgaccggcagttgtccaagatgtgtatgctgtttacctttcaatcctttcgaaaattgatccttcaggaaggagaaaagatagtacttgtatggttggatacaccatataatcaagcagtatatggccttgtggacaagtttggttgCTTAGTGGTGAGACTTGTCTTTTTACCTTTTGAAGAAAGTTCATATGCAACATTTGCCAGGTCCACTTCAGGACAATATCCAGGAAAAAGCAAGAAATTGGGAAACGGCGTGACAGAATCTCTGAAGTTAGTTTTGTTGATTGGCCTTGTTTTTATGGCATTTGGTCCAAGTTATTCTTATTCACTCATTAGATTGCTTTATGGTGAAAAATGGAGTGATGGAGAAGCATCAACTGCCCTCCGCTGTTATTGCTTTTATGTCATTGTTTTGGCCATGAATGGAACCTCTGAAGCCTTTATGCATGCAGTTGCAACAGAGAGCCAACTCAAGCGTTCAAATGATTCACTACTTGTTTTCTCTTTGATCTATATAGTTTTGAATGTTCTGCTAATAAGGTCAGCTGGGGCAGTTGGCTTGATTATGGCAAATTCTCTCAATATGACCTTGAGGATTTTATACTCTGCTATATTCATAAAGAATTACTTCCAGGGATCTTCCTCGTTTTCTTTCTATGCTATTGCCGGGAAAAACCTTTCATCAGAAGAATTATTCGCTTTAATGATCATGTGGACTGAAGATTTCTGCAATATAACTTTGAGTTAG 1470 0.3442 MSHSKLSKAKLVAMSKDKDATNLSRTFKYLLATQFLSRGIPFIFNTWIVRHLTQEDYALYAVQFHLLVTCILFLSREGFRRACLRMDLKCDGTSMGDVVKLMKVVWMSFPLGIFITVVVCLFVFWWQQISYSSPHGQAILINGFACILELLAEPVYILSQNLVLLELRLMVETVATLSWCLTMYFLIVKQTGIEKSIIFALSQSAYGACLFLGYWGYLLLSQKFRVSYLFPFREGKVIDFDRQLSKMCMLFTFQSFRKLILQEGEKIVLVWLDTPYNQAVYGLVDKFGCLVVRLVFLPFEESSYATFARSTSGQYPGKSKKLGNGVTESLKLVLLIGLVFMAFGPSYSYSLIRLLYGEKWSDGEASTALRCYCFYVIVLAMNGTSEAFMHAVATESQLKRSNDSLLVFSLIYIVLNVLLIRSAGAVGLIMANSLNMTLRILYSAIFIKNYFQGSSSFSFYAIAGKNLSSEELFALMIMWTEDFCNITLS 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00063 489 Pfam Rft protein 26 477 IPR007594 GO:0006488|GO:0016021
Gma12g00063 489 CDD MATE_rft1 22 453 - -
Gma12g00063 489 PANTHER ENDOPLASMIC RETICULUM MULTISPAN TRANSMEMBRANE PROTEIN-RELATED 17 464 IPR007594 GO:0006488|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00063 Gma-Chr12 459622 468723 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00063 K06316 - gmx:100811128 883.634