Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00035 ATGGATAGAACTGTTGATGCCGATATTGTGATCGTGGGAGGTGGTATTTGTGGCCTTGCAACAGCCCTTGCCCTTCACAGGAAGAGAATTAAAAGTCTGGTGTTAGAAAGATCAGAGAATTTGCGAGCCACAGGAGCAGCTATAATAGTGCAGGCAAATGGCTGGCGTGCACTTGATCAGCTTGGCATTGGCTCAACACTTAGACAAACTGCTATTCAAATAGAAGGGGGAAGATTTATATCTCTCAACGAGGCTGAGCCAATGGAATTTCCATTTGGGGTTAATCAGGAACTTCGTTGTTTAAAGCGTACTGACCTGGTGAAAGCCATGGCCGATAATTTACCGGTGGGGACTATACGTATGAACTGTCAAGTGGTTTCCATTGAATTAGATCCTTTAACACACTCTCCACAGCTTCAGCTTAGCAACGGAAGCATCCTTCAAGCTAAGGTTGTTATTGGATGTGATGGCGTGAATTCTGCCATTGCAAATATGTTTGGGTTACACCGAACGAAGCTCTTGCTTTTCTCTACATGTGTTGCACGAGGCTTCACAAATTTTCCAAATGGTCATCAATTTGCCAGTGAGTTTGTTGTGATGAGCAGAGGTCAAGTCCAACTCGGAAGAATCCCAGTGTCTGACCAGCTCGTTTATTGGTTTGTCACAAGGCCAAGGACTTCTAAAGATTCAACAATTTGGAAAGAGCCAGTTCTTATTAGGCAGTCATTAATAGAATCAATGAAAGGTTTCCCAGAAGGGGCTGTGGAGATGATACAAAACTGCAAGTTGAGCTTCTTGCATCTGACTGAGTTGAAGTATCGAGCACCGTGGGACTTAGTCTTGAACAAGTTCAGGAAAGGTACAGTGACAATTGCTGGTGACGCAATGCATGCCACAGGCCCATTCATTGCACAGGGTGGCTCAGCTTCCATAGAAGATGCCCTGGTTCTGGCTAGATGCCTGGCCCAAAAGAAATTTGCGGAAGGGATGAACATCGCAGACGCAGAAGAAGCATTTGATCAATATCTCAAAGAAAGGAAGATGAGAATCTTTTGGCTCTCTTTGCATTCTTTCCTTGTTGGGAAGAAGCTTGACACCAAATCATCCATAGTCAGATTCATTATCCTTGCAATCATGGCCATTCTGTTTAGAGACCCCGATTGGCATTCCCGCTATCATTGTGGACTTCTATAG 1194 0.4439 MDRTVDADIVIVGGGICGLATALALHRKRIKSLVLERSENLRATGAAIIVQANGWRALDQLGIGSTLRQTAIQIEGGRFISLNEAEPMEFPFGVNQELRCLKRTDLVKAMADNLPVGTIRMNCQVVSIELDPLTHSPQLQLSNGSILQAKVVIGCDGVNSAIANMFGLHRTKLLLFSTCVARGFTNFPNGHQFASEFVVMSRGQVQLGRIPVSDQLVYWFVTRPRTSKDSTIWKEPVLIRQSLIESMKGFPEGAVEMIQNCKLSFLHLTELKYRAPWDLVLNKFRKGTVTIAGDAMHATGPFIAQGGSASIEDALVLARCLAQKKFAEGMNIADAEEAFDQYLKERKMRIFWLSLHSFLVGKKLDTKSSIVRFIILAIMAILFRDPDWHSRYHCGLL 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00035 397 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 2 396 - -
Gma12g00035 397 SUPERFAMILY FAD/NAD(P)-binding domain 7 386 IPR036188 -
Gma12g00035 397 Pfam FAD binding domain 7 324 IPR002938 GO:0071949
Gma12g00035 397 Gene3D - 8 370 IPR036188 -
Gma12g00035 397 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 2 396 IPR044560 -
Gma12g00035 397 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 - -
Gma12g00035 397 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 148 163 - -
Gma12g00035 397 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 286 301 - -
Gma12g00035 397 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 301 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00035 Gma-Chr12 280395 282747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00035 1 361 Miscellaneous Gene Families AT5G05320 36.193 5.59e-71 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00035 - - gmx:100805243 783.482