Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00016 ATGGAGAATTGGGAAACGGAGGAGGTTGAAGGTGAAAGTCCCCTTCCGGTTCTGGAGGCTGTTGACTACAGAGGTGGAGCCTCGGTGAGATCGAAATCTGGGTCATGGAGATCCGCTGGGTTTATCATAGGTGTGGAAGTGGCGGAGAGGATTGCATATTATGGGATTCAGGGGAACCTCATAACCTACCTCACGGGCCCACTCCATCAGACTACTGCCACCGCCGCCGAGAATGTTAATATCTGGTCAGGAACTGCTTCCTTGCTTCCTCTCTTTGGGGCTTTCCTTGCTGATTCTCTTCTCGGCCGCTACCGCACTATAATACTCGCTTCCTTCATCTATATTTTGGGACTAGGCTTGTTAACACTATCAGCTATGCTTCCCTCTCCCACCGGTTCTGAGTGCCAGGTTGGCAATGAATTCAAATCATGCTCTCCTCAGTCGCAAATAGTTTTGTTCTTTATCTCTCTTTATTTGGTCGCCATTGGGCAAGGTGGACATAAGCCCTGTGTTCAGGCTTTTGGTGCAGATCAATTCGATGAAAAACATCCAAAGGAGTACAAAGATAGAAGCTCTTTCTTTAATTGGTGGTATTTTACTATGTGTGCAGGTTGCATGGCAACTCTTTCCATCTTGAACTATATACAAGATAACCTAAGTTGGGTTCTTGGATTTGGAATTCCTTGTGTTGCCATGATTATTGCATTGCTTGTTTTCATGCTTGGAACAGTGACCTACAGGTTTAACATTCAGCAGCGTGGCAAAAGCCCCTTTCTCAGAATTGGCCGTGTATTTGTTGCTGCTATAAGAAATCGCCGATCCACCCTATCAAGCACAGCTGTCAAAGCAGAACAATTTGAGTTCCTCAACAAAGCATTGTTAGCGCCAGAGGATTCTATAGAAGACGAGAGTTGTAGCCTTAGTGAGGTGGAAGAAGCAAAAGCAGTACTAAGGCTGGTTCCTATTTGGGCTACAACTCTGGTTTATGCTGTGGTGTTTGCTCAAGTTCCTACGTTCTTTACCAAGCAAGGGATTACTATGGAGAGAACAATATTTCCTGGCTTTGACATACCCGCTGCTTCTCTTCAAACGCTTGTCACTGTGGCCATTGTTCTGTTCAGCCCCATCTATGACCGCCTATTTGTGCCAATGGCAAGAGCTATTACTGGCAAACCCTCAGGAATCACAATGCTGCAAAGAATTGGGACTGGAATATCTATATCCATATTTACCATAGTATTTGCAGCCCTTGTTGAGATGAAAAGATTGAAAACAGCTCAAGAGTCTGGTGTTGTTGATGAACCTAATGCAACTGTTCCAATGGGTATATGGTGGTTGATTCCCCAATATTTCTTGTTCGGAGTCTCTGAAGTTTTTACCATGGTTGGTCTGCAGGAATTTTTCTATGACCAGGTCCCAAATGAACTAAGAAGCATGGGTCTTGCTCTCTACTTGAGCATCTTTGGTGTTGGGAGCTTTATAAGTGGCTTTCTCATTTCTGTGATAGAGAAACTGTCTGGCAAAGATGGACAAGACAGTTGGTTTGCCAATAATCTGAATAAGGCGCATGTTGATTACTTTTATTGGCTACTTGCTGGACTCGGTGTAATGGGATTGGCCTTGTTCATTTGCTCTGCTAAATCCTACATTTACAATCACCAAGGAATCAGACGAGAATTGTGA 1683 0.4427 MENWETEEVEGESPLPVLEAVDYRGGASVRSKSGSWRSAGFIIGVEVAERIAYYGIQGNLITYLTGPLHQTTATAAENVNIWSGTASLLPLFGAFLADSLLGRYRTIILASFIYILGLGLLTLSAMLPSPTGSECQVGNEFKSCSPQSQIVLFFISLYLVAIGQGGHKPCVQAFGADQFDEKHPKEYKDRSSFFNWWYFTMCAGCMATLSILNYIQDNLSWVLGFGIPCVAMIIALLVFMLGTVTYRFNIQQRGKSPFLRIGRVFVAAIRNRRSTLSSTAVKAEQFEFLNKALLAPEDSIEDESCSLSEVEEAKAVLRLVPIWATTLVYAVVFAQVPTFFTKQGITMERTIFPGFDIPAASLQTLVTVAIVLFSPIYDRLFVPMARAITGKPSGITMLQRIGTGISISIFTIVFAALVEMKRLKTAQESGVVDEPNATVPMGIWWLIPQYFLFGVSEVFTMVGLQEFFYDQVPNELRSMGLALYLSIFGVGSFISGFLISVIEKLSGKDGQDSWFANNLNKAHVDYFYWLLAGLGVMGLALFICSAKSYIYNHQGIRREL 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00016 560 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 93 117 IPR018456 GO:0006857|GO:0016020|GO:0022857
Gma12g00016 560 CDD MFS_NPF5 36 551 IPR044739 GO:0042937|GO:0042938|GO:0071916
Gma12g00016 560 PANTHER PEPTIDE/NITRATE TRANSPORTER PLANT-LIKE PROTEIN 20 555 - -
Gma12g00016 560 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 20 555 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gma12g00016 560 Pfam POT family 104 514 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gma12g00016 560 Gene3D MFS general substrate transporter like domains 11 557 IPR036259 -
Gma12g00016 560 SUPERFAMILY MFS general substrate transporter 54 545 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00016 Gma-Chr12 130487 133079 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g00016 12 550 Organic Solute Cotransporters AT1G22540 64.428 0.0 709
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00016 K14638 - gmx:100776720 1082.78