Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02574 ATGAGTTTATCATTTTGTTCACTGATGACAGCAAAGCCTTGTTCCATGATCAATACTGGGAGCAATAGGAAACCATGTTGTGGTCGTAGAAGATTTGGTGTTATAATTAGGTCGGAAGTAAATGTGGCTCCCAAACAAAGAGGAATTCTCCGATTGTCAAAACAAGGAGTTCCTCTTGCTATCATTAGTCCTTGTAGCAAGCTTAAGCCACTGTTTAAGCCCATTTTTCTTAATGATGCCTATGAAATGTGCAGAAATATTTGCGCGGAATATGCCAAGACCTTTTATCTAGGTACAACCTTGCTTATGACAGAAGAAAGACAGAAAGCTATATGTGCAATTTATGTTTGGTGCAGAAGGATGGATGGACTTGTTGATGATCCTAACGCGGTGTATATGAGCTCTGCTATTCTTGATAGGTGGGAAGATAGATTGCACGACATTTTTAATGGACAACCCTATGATATGCTTGATGCTGCTCTTACTGATATCGTCTCCAAGGACATGATACAAAACATGAGAATGGATACGAGGAAAGCCCGATACAACAATTTTCAAGAGTTATATCTTTACTGCTACTATGTGGCGGGAACTGTGGGCTTAATGACTGTTCCGATAATGGGCATTGCCCAGGAGTCTGTCATCCCAATTCAAAGTGTATATGATGTTGCACTATATCTGGGTGTAGGAAATCAACTCACAAACATTCTTAGAGATGTGGGGGAGGAtgcattaagagatagaGTGTACCTTCCCCAAGACGAACTAGCCCAATTTGAATTATGTGACAAGGATGTTTTTTCAAGAAAGGTCAGTGAAAAATGGAGAAACTTTATGAAATATCAGATTTCAAGGGCAAGATTCTACTTCAACCGGGCAGAAGAAGGAGTTTCTCAGCTCCAAAAAGCCAGTCGTTGGCCAGTTTGGTCATCATTAATATTGTATCGTAAGATCTTGGATGCAATTGAAGACAACGATTACGACAATTTGACTAAACGAGCCTGTGTGGGATGTGCCAAGAAATTTTTGACATTGCCCCTAACTTACACTAGATCTCTCTCAAATCCCAAAATGAAACTTGGTCCTTCTTTAACGAGGCCTATCTAG 1107 0.3966 MSLSFCSLMTAKPCSMINTGSNRKPCCGRRRFGVIIRSEVNVAPKQRGILRLSKQGVPLAIISPCSKLKPLFKPIFLNDAYEMCRNICAEYAKTFYLGTTLLMTEERQKAICAIYVWCRRMDGLVDDPNAVYMSSAILDRWEDRLHDIFNGQPYDMLDAALTDIVSKDMIQNMRMDTRKARYNNFQELYLYCYYVAGTVGLMTVPIMGIAQESVIPIQSVYDVALYLGVGNQLTNILRDVGEDALRDRVYLPQDELAQFELCDKDVFSRKVSEKWRNFMKYQISRARFYFNRAEEGVSQLQKASRWPVWSSLILYRKILDAIEDNDYDNLTKRACVGCAKKFLTLPLTYTRSLSNPKMKLGPSLTRPI 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02574 368 SFLD Isoprenoid Synthase Type I 78 351 - -
Gma11g02574 368 PANTHER PHYTOENE SYNTHASE, CHLOROPLASTIC 66 359 - -
Gma11g02574 368 ProSitePatterns Squalene and phytoene synthases signature 2. 227 252 IPR019845 GO:0016765
Gma11g02574 368 CDD Trans_IPPS_HH 82 341 IPR033904 GO:0004311
Gma11g02574 368 PANTHER BIFUNCTIONAL LYCOPENE CYCLASE/PHYTOENE SYNTHASE 66 359 - -
Gma11g02574 368 SFLD Phytoene synthase like 78 351 IPR044843 GO:0004311
Gma11g02574 368 Pfam Squalene/phytoene synthase 91 335 IPR002060 GO:0009058
Gma11g02574 368 SUPERFAMILY Terpenoid synthases 79 354 IPR008949 -
Gma11g02574 368 Gene3D Farnesyl Diphosphate Synthase 74 346 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02574 Gma-Chr11 40725628 40727577 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02574 K02291 - gmx:100782394 628.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00009 18 98590 100262 Gma11g02574 11 40725628 40727577 GST