Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02557 ATGACGATGCGACCCTTACTAACCCTCTCCTATTTTCCCAACTACACTTCTCTGAGAATGGAAAGCGTCCATCCAACGATAAGATTGCCTCTAATGAAGTTTAGTGGTCAAATTTTTTATATCAGGACTTTTGATGCTGTAGAGAAAGCTGCAACAAAGCTCTTACAAATTCTCCAAGAGATGATGCAAATTGCAATTGGATTTGACATTGAGTGGAAACCCACCTTCAGAAAAGGTGTTCCACCCGGAAAGGTAGCAGTGATGCAGATATATGGTGACACTAGACATTGTCATGTTGGAGCTGGGATTGATGGTGATGCTGTGAAGGTTTTTAGAGATTATAACATATCTGTTAAAGGTGTGACGGATCTTTCTTTTCATGCTAATCGAAAGCTTGGTGGAGATCATAAGTGGGGTCTTGCATCTTTGACTGAAAAACTTTTATCAAAACAGCTTAAAAAGCCTAACAAAATAAGACTGGGAAATTGGGAGACTCCTGTTTTGTCAAAGGAGCAACTAGAGTATGCTGCAACAGATGCTTTTGCTTCTTGGTATCTTTATCAGATCTCCCGGACGCCCAGAAAGTCACTGACAGAAGTGGCGAAGTTGATGGTGTACCTCAAGAATGACTACATCCTTAGTGTGTATTGA 651 0.4071 MTMRPLLTLSYFPNYTSLRMESVHPTIRLPLMKFSGQIFYIRTFDAVEKAATKLLQILQEMMQIAIGFDIEWKPTFRKGVPPGKVAVMQIYGDTRHCHVGAGIDGDAVKVFRDYNISVKGVTDLSFHANRKLGGDHKWGLASLTEKLLSKQLKKPNKIRLGNWETPVLSKEQLEYAATDAFASWYLYQISRTPRKSLTEVAKLMVYLKNDYILSVY 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02557 216 SMART 35exoneu6 38 195 IPR002562 GO:0003676|GO:0006139|GO:0008408
Gma11g02557 216 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN-RELATED 26 99 - -
Gma11g02557 216 Gene3D - 21 95 IPR036397 GO:0003676
Gma11g02557 216 Gene3D - 96 191 IPR036397 GO:0003676
Gma11g02557 216 SUPERFAMILY Ribonuclease H-like 19 190 IPR012337 -
Gma11g02557 216 PANTHER 3-5 EXONUCLEASE 26 99 - -
Gma11g02557 216 CDD WRN_exo 41 189 - -
Gma11g02557 216 Pfam 3'-5' exonuclease 90 188 IPR002562 GO:0003676|GO:0006139|GO:0008408
Gma11g02557 216 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN-RELATED 99 192 - -
Gma11g02557 216 PANTHER 3-5 EXONUCLEASE 99 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02557 Gma-Chr11 40617310 40620244 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02557 K22807 K10900 gmx:100801291 291.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00024 18 197907 201607 Gma11g02557 11 40617310 40620244 GST