Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02453 ATGGCGGAGCTCCGGCACTCTTCCTCCCTCGGCAGCCGAGCCTCCAATTCTCCGATGAAGCGCGACGCCGTCGCCGTCGGTAGCGATTCCTCCCCTCTCATTCCCGACAACCACCTCGCCCACGACGACGACGAGCACGATCGACACTCGTCCAAGGACCGCGACCGGCAACTCTGCtccttcttcaccgacgaccctagggtttcgcctcacaactccaggatctctatctttttcacattacttcttcttctcgttggtttagtttccctattcagaatctttcataatctcAATGCGCCTTACTTGTGTAAAAAAGATGGGATTGTTCTTCACTGCCCGCATGTTAAAGAATCGCCTTCACTTTGGGAAAATCCTTTCTCTTCCACAACATCTTGGAAGCCCTGTGCTGAGCGCCAGGCTGGTGTTTTACCAGAACTTCCTCCTGAAAATGAAACAAATGGCTATATATTCATCCATGCTGAAGGTGGTCTAAATCAGCAGAGAATTGCGATATGCAATGCAGTGGCTGTGGCAAAAATATTGAATGCCACCCTTATTTTGCCTGTTTTGAAGCAGGACCAGATTTGGAAAGACCAAACGAAATTTGAAGACATTTTTGATGTGGATCACTTCATTGACTACCTGAAGTATGATGTTCGTATTGTCCGTGATATCCCAACATGGTTTACCGATAAATCAGAGTTATTTACTAGCATAAGACGGACTGTAAAAAACATTCCCAAATATGCACCGGCACAATTTTACATCGATAATGTTTTGCCCCGAGTCAAGGAGAAGAAGATTATGGCTCTGAAACCCTTTGTTGACAGGCTGGGATATGACAATGTTCCTCCTGAAATCAACAAGTTGAGATGTAGAGTTAATTATCATGCGCTGAAATTTCTTCCTGATATAGAGCAGATGGCTAATTCACTAGCATCAAGAATGAGAAACCGAACTGGCAGTTCAAACCGTTACATGGCTCTGCATCTTAGATTTGAGAAAGGAATGGTGGGACTATCATTCTGTGATTTTGTGGGGACAAGAGACGAGAAAGCCAAAATGGCGGAGTATAGAAAAAAGGAGTGGCCTCGACGGTACAAGAATGGTTCCCATCTGTGGCAATTAGCTCTGCAGAAGCGAAAGGAAGGACGATGTCCTCTAGAGCCTGGAGAAGTGGCTGTTATTCTTCGGGCCATGGGCTATCCAAAGGAAACTCAAATTTACGTAGCTTCTGGACAGGTGTATGGTGGACAGAACCGGATGGCTCCACTAAGGAATATGTTCCCTAATCTGGTTACCAAGGAAGAGTTGACAACTAAAGAGGAGTTAGATGGTTTCAGAAAGCATGTCACTAGCCTGGCAGCTCTTGACTTCTTGGTGTGCTTGAAGTCAGATGTATTTGTGATGACCCATGGAGGGAACTTTGCTAAGCTGATCATTGGAGCACGAAGATACATGGGTCACCGTTTAAAATCAATTAAGCCTGACAAAGGGCTGATGTCCAAGTCTTTTGGGGATCCATATATGGGTTGGGCTCCTTTTGTAGAAGATGTTGTTGTTACTCACCAGACACGGACAGGATTGCCAGAAGAGACTTTCCCTAACTATGACCTCTGGGAGAACCCTCTGACACCGTGCATGTGTAGAGCCTGA 1659 0.4286 MAELRHSSSLGSRASNSPMKRDAVAVGSDSSPLIPDNHLAHDDDEHDRHSSKDRDRQLCSFFTDDPRVSPHNSRISIFFTLLLLLVGLVSLFRIFHNLNAPYLCKKDGIVLHCPHVKESPSLWENPFSSTTSWKPCAERQAGVLPELPPENETNGYIFIHAEGGLNQQRIAICNAVAVAKILNATLILPVLKQDQIWKDQTKFEDIFDVDHFIDYLKYDVRIVRDIPTWFTDKSELFTSIRRTVKNIPKYAPAQFYIDNVLPRVKEKKIMALKPFVDRLGYDNVPPEINKLRCRVNYHALKFLPDIEQMANSLASRMRNRTGSSNRYMALHLRFEKGMVGLSFCDFVGTRDEKAKMAEYRKKEWPRRYKNGSHLWQLALQKRKEGRCPLEPGEVAVILRAMGYPKETQIYVASGQVYGGQNRMAPLRNMFPNLVTKEELTTKEELDGFRKHVTSLAALDFLVCLKSDVFVMTHGGNFAKLIIGARRYMGHRLKSIKPDKGLMSKSFGDPYMGWAPFVEDVVVTHQTRTGLPEETFPNYDLWENPLTPCMCRA 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02453 552 Pfam GDP-fucose protein O-fucosyltransferase 156 488 IPR019378 -
Gma11g02453 552 MobiDBLite consensus disorder prediction 36 52 - -
Gma11g02453 552 MobiDBLite consensus disorder prediction 1 52 - -
Gma11g02453 552 CDD O-FucT_plant 156 491 IPR024709 -
Gma11g02453 552 Gene3D - 298 495 - -
Gma11g02453 552 PANTHER PROTEIN PECTIC ARABINOGALACTAN SYNTHESIS-RELATED 1 552 - -
Gma11g02453 552 PIRSF UCP009360 35 552 IPR024709 -
Gma11g02453 552 PANTHER O-FUCOSYLTRANSFERASE 2-RELATED 1 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02453 Gma-Chr11 39840452 39846913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02453 122 551 Miscellaneous Gene Families AT1G22460 35.255 7.11e-92 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02453 - - gmx:100777425 1116.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00121 18 959545 966021 Gma11g02453 11 39840452 39846913 GST