Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02399 ATGGAATCGGAATCTTCAATCTCCGATTCTGAAACACACCCTCTCTCGGACCAAATCGACGACGCGTGCCACGACATGAGCTCCCTGGAAGAGCTCGCGAGTCGCGGCGCTTGGCGTTCCATCATCGACAAGGTCTCACGCGCCCGCGCTCTCTCTCTCCTCCACAAGCCCCACGACCACCTCACCTACCTCGCTTTCAACGCCCTCGCCTTCACAAAACTACGTCGTTTCAACGAAGCCTCCGCGGAACTCGATTCCCTCGAAGACCTCCACAGTTCCCACTACCGCTACGAAACCTACCCCAAAATCTACCCCAATCGGATTGGATCCATGGTCCCTTTCTCCCTCCGCTGGGTCCACGCCCTAATTCCCATCAAATTAGGGCAACGTCAGCAAGGCATGGATCGCTTCTACATTCTTCTCGATTTCGTGCGTGGAAAGATTAATGAAAAGGAGAAACAGAACAACCTCGGTGTCTCCCTTAATCTGTGGCGTAAAAGAGAGGTTTTTGTCGTGAATTGCATCATAGGGAACCATTTGAGTCAGAAAGAGTTTGGTGTGTGCTTAAGCTTGATGAAGGAGCTTCTCTCTCGCGATTGTTCTGACCCTTTGCTGGTTTCGCAGCTTGGGTATATGCAGTTGCAGATTGGGGACTTGGAGGGTGCGAAAATTTCGTTCTTGAAGGTGGAGGAATTGGGGAAGAGTAATAATGGTTCATTGAGTGAGGTTGAGTTCAGGAACCTTGTGAATAGGAACAAGGCGTTGGTGTATTTGGTTGGGAAGGATTATGTGTCTGCGGTGAGGGAGTACGAGGAGTGCATTGAGAGGGACAGTGCGGATGTTGTGGCAGTGAACAACAAGGCTCTGTGTTTGATGTATCTGAGGGACTTGTCGGATTCTATTAAGGTGTTGGAGAGTGCGCTTGAGAGAGTTCCCACTGTGGCTCTCAATGAGACGCTTGTTGTCAATTTGTGTACTGGATTGCTCGTGTTGCACCTGATGATTTTGATGCATCTTGTACTCGTACATGAGAATTAG 1038 0.499 MESESSISDSETHPLSDQIDDACHDMSSLEELASRGAWRSIIDKVSRARALSLLHKPHDHLTYLAFNALAFTKLRRFNEASAELDSLEDLHSSHYRYETYPKIYPNRIGSMVPFSLRWVHALIPIKLGQRQQGMDRFYILLDFVRGKINEKEKQNNLGVSLNLWRKREVFVVNCIIGNHLSQKEFGVCLSLMKELLSRDCSDPLLVSQLGYMQLQIGDLEGAKISFLKVEELGKSNNGSLSEVEFRNLVNRNKALVYLVGKDYVSAVREYEECIERDSADVVAVNNKALCLMYLRDLSDSIKVLESALERVPTVALNETLVVNLCTGLLVLHLMILMHLVLVHEN 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02399 345 SMART tpr_5 203 236 IPR019734 GO:0005515
Gma11g02399 345 SMART tpr_5 281 314 IPR019734 GO:0005515
Gma11g02399 345 SMART tpr_5 247 280 IPR019734 GO:0005515
Gma11g02399 345 SUPERFAMILY TPR-like 193 314 IPR011990 GO:0005515
Gma11g02399 345 Gene3D Tetratricopeptide repeat domain 171 326 IPR011990 GO:0005515
Gma11g02399 345 PANTHER D-ALANYL-D-ALANINE CARBOXYPEPTIDASE 13 326 - -
Gma11g02399 345 PANTHER F-BOX DOMAIN, TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN PROTEIN-RELATED 13 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02399 Gma-Chr11 39356917 39359294 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02399 K20309 - gmx:100779190 643.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00176 18 1446295 1449406 Gma11g02399 11 39356917 39359294 GST